| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2860991 = | 48 (0.850) | 5 (0.090) | 4/250 | NT | 9.2% | coding (341/1086 nt) | gllD | 4‑oxalomesaconate tautomerase |
| ? | NC_002947 | 2861049 = | 53 (0.970) | coding (283/1086 nt) | gllD | 4‑oxalomesaconate tautomerase | |||||
CATCATCCGCGCTTCGCAGCGCGATGACGCCGACGTGGACTACCTGTTCGCTCAGGTGGTGGTGGACGAGGCGCGGGTGGACTATGGGCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2861143‑2860991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCCGGG > NC_002947/2861049‑2861195 CATCATCCGCGCTTCGCAGCGCGATGACGCCGACGTGGACTACCTGTTCGCTCAGGTGGTGGTGGACGAGGCGCGGGTGGACTATGGGCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGG < 5:191677/149‑1CATCATCCGCGCTTCGCAGCGCGATGACGCCGACGTGGACTACCTGTTCGCTCAGGTGGTGGTGGACGAGGCGCGGGTGGACTATGGGCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGG > 7:235464/1‑149 TCCGCGCTTCGCAGCGCGATGACGCCGACGTGGACTACCTGTTCGCTCAGGTGGTGGTGGACGAGGCGCGGGTGGACTATGGGCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGC > 4:353649/1‑148 GCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCG > 3:175534/1‑147 ACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCG > 1:331325/1‑149 ACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCG > 5:99706/1‑149 CAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATG < 4:175534/149‑1 TTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCAGAATGTTGCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGC > 2:267353/1‑149 GCCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCC > 6:144903/1‑149 CCGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCCG < 3:96067/149‑1 CGCAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCCGG < 6:191677/149‑1 CAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCCGGG > 5:305800/1‑148 CATCATCCGCGCTTCGCAGCGCGATGACGCCGACGTGGACTACCTGTTCGCTCAGGTGGTGGTGGACGAGGCGCGGGTGGACTATGGGCAAAACTGCGGCAACATTCTGGCCGGCGTAGGGCCGTTCGCCCTTGAGCGCGGCCTG‑‑‑GTGGCCGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/2861143‑2860991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgcAGTTTTGCCCATAGTCCACCCGCGCCTCGTCCACCACCACCTGAGCGAACAGGTAGTCCACGTCGGCGTCATCGCGCTGCGAAGCGCGGATGATGGCGACTTTGCTGGTGAGCGAGTCGGCGCCGCCGATGCCGTCAATCTGCCGGG > NC_002947/2861049‑2861195 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |