New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 2970920	58 (1.020)	4 (0.070)	4/252	NT	6.4%	coding (1259/2391 nt)	PP_2599	chemotaxis sensory transducer family protein
	?	NC_002947	= 2970982	60 (1.090)					coding (1321/2391 nt)	PP_2599	chemotaxis sensory transducer family protein

GCGCTTTGTCGAGGAGCTGTCCGGTGTGGCTGCAGTGGCCATCGAAACCCGCCAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2970771‑2970920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCAGTGGCCACCGGTATAGGGGCTCTTGGCATCGATGGCGTCTGCCAGCAGCTTGATCATGGCGTCCAGCAGGCGTTGCTGGG  <  NC_002947/2970982‑2970836                                                                                                                                                                                                                                                                                                           GCGCTTTGTCGAGGAGCTGTCCGGTGTGGCTGCAGTGGCCATCGAAACCCGCCAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCG                                                                                                                                                      <  4:192716/149‑1           GAGGAGCTGTCCGTTGTTGCTGCAGTGTCCATCGAAACACGACAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGACATCGATGCCAAGAGACCCTATACCGGTGGACACTGCGATCGtgttc                                                                                                                                             <  6:353923/148‑6                                            GAAACCCGCCAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCT                                                                                                           >  3:98052/1‑149                                                 CCGCCAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGC                                                                                                       >  4:48224/1‑148                                                                     AGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCA                                                                                  <  4:98052/149‑1                                                                       CAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCAGT                                                                                <  3:48224/149‑1                                                                                                                                                    CGAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCAGTGGCCACCGGTATAGGGGCTCTTGGCATCGATGGCGTCTGCCAGCAGCTTGATCATGGCGTCCAGCAGGCGTTGCTGG   <  3:336571/149‑1                                                                                                                                                     GAACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCAGTGGCCACCGGTATAGGGGCTCTTGGCATCGATGGCGTCTGCCAGCAGCTTGATCATGGCGTCCAGCAGGCGTTGCTGGG  >  6:14816/1‑149                                                                                                                                                                                                                                                                                                           GCGCTTTGTCGAGGAGCTGTCCGGTGTGGCTGCAGTGGCCATCGAAACCCGCCAGTTGGTCGAAGCCCAGCAACGCCTGCTGGACGCCATGATCAAGCTGCTGGCAGACGCCATCGATGCCAAGAGCCCCTATACCGGTGGCCACTGCGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/2970771‑2970920 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcgaACGGACCGCTGTCGGCTGCCACTGCCTGATCCAGCAGCATCTGCGCCAGCTGAGGCACCCGCTCGCAGTGGCCACCGGTATAGGGGCTCTTGGCATCGATGGCGTCTGCCAGCAGCTTGATCATGGCGTCCAGCAGGCGTTGCTGGG  <  NC_002947/2970982‑2970836

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.