New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 3193191 = | 32 (0.560) | 3 (0.060) | 3/250 | NT | 7.9% | coding (270/1425 nt) | prr | gamma‑aminobutyraldehyde dehydrogenase |
? | NC_002947 | 3193230 = | 39 (0.720) | coding (231/1425 nt) | prr | gamma‑aminobutyraldehyde dehydrogenase |
AGGTCCATGCCGCAGTGCAAAGCGCGGATGCGGCCTTCGAAGCCTGGTCGCAAACACCGCCCAAGGACCGTGCGGCACTGCTGCTCACCCTCGCCGACCGCATCGACGCCCAGGCCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3193342‑3193191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcCTGGGCGTCGATGCGGTCGGCGAGGGTGAGCAGCAGTGCCGCACGGTCCTTGGGCGGTGTTTGCGACCAGGCTTCGAAGGCCGCATCCGCGCTTTGCACTGCGGCATGGA > NC_002947/3193230‑3193339 AGGTCCATGCCGCAGTGCAAAGCGCGGATGCGGCCTTCGAAGCCTGGTCGCAAACACCGCCCAAGGACCGTGCGGCACTGCTGCTCACCCTCGCCGACCGCATCGACGCCCAGGCCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGC < 1:44489/149‑1 AGGTCCATGCCGCAGTGCAAAGCGCGGATGCGGCCTTCGAAGCCTGGTCGCAAACACCGCCCAAGGACCGTGCGGCACTGCTGCCCACCCTCGCCGACCGCATCGACGCCCAGGCCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGC < 3:198909/149‑1 GTCCATGCAGCAGTGCAAAGCGCGGATGCGGCCTTCGAAGCCTGGTCGCAAACACAGCCCAAGGACCGTGCGGCACTCCTGCTCACCCTCGCCGACCCCATCGACGCCCAGGCCGCGGTGTTCGCCCGCCTGCAGGCGGACAACTGCG > 7:316475/1‑148 AGGCCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGCGGCCTGGGCGTCGATGCGGTCGGCGAGGGTGAGCAGCAGTGCCGCACGGTCCTTGGGCGGTGTTTGCGACCAGGCTTCGAAGGCCGCATCCGCGCTTTGCACTGCGGCATG > 6:69987/1‑149 CCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGCGGCCTGGGCGTCGATGCGGTCGGCGAGGGTGAGCAGCAGTGCCGCACGGTCCTTGGGCGGTGTTTGCGACCAGGCTTCGAAGGCCGCATCCGCGCTTTGCACTGCGGCATGGA > 5:293913/1‑148 CCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGCGGCCTGGGCGTCGATGCGGTCGGCGAGGGTGAGCAGCAGTGCCGCACGGTCCTTGGGCGGTGTTTGCGACCAGGCTTCGAAGGCCGCATCCGCGCTTTGCACTGCGGCATGGA < 6:293913/148‑1 AGGTCCATGCCGCAGTGCAAAGCGCGGATGCGGCCTTCGAAGCCTGGTCGCAAACACCGCCCAAGGACCGTGCGGCACTGCTGCTCACCCTCGCCGACCGCATCGACGCCCAGGCCGCGGTGTTCGCCCGCCTGGAGGCGGACAACTGCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3193342‑3193191 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcggcCTGGGCGTCGATGCGGTCGGCGAGGGTGAGCAGCAGTGCCGCACGGTCCTTGGGCGGTGTTTGCGACCAGGCTTCGAAGGCCGCATCCGCGCTTTGCACTGCGGCATGGA > NC_002947/3193230‑3193339 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |