New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3552999 =	54 (0.950)	3 (0.060)	3/248	NT	5.5%	coding (656/978 nt)	PP_3137	group 2 family glycosyl transferase
	?	NC_002947	3553043 =	52 (0.960)					coding (700/978 nt)	PP_3137	group 2 family glycosyl transferase

CCGACGTGACTCACGCAGCCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3553063‑3552999 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCG  >  NC_002947/3553043‑3553187                                                                                                                                                                                                                    CCGACGTGACTCACGCAGCCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGG                                                                                                                                                      <  4:111772/62‑1             ACGCAGCCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGT‑GGGCCTGGGCATACCTTTGGTGATCGCGC                                                                                      >  7:268826/1‑113             ACGCAGCCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGT‑GGGCCTGGGCATACCTTTGGTGATCGCGC                                                                                      <  8:268826/113‑1                   CCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGGCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGTTGGGGCCTGCTGTTGCTG                                             >  4:110498/1‑149                                                              GCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCG  >  6:211431/1‑149                                                              GCATTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCG  >  7:252485/1‑149                                                                                                                                                                                                                    CCGACGTGACTCACGCAGCCAATGCCGCTCGGGTGGCTGGCCATGCAGGTAGGCGCCCTCGGCAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3553063‑3552999 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcatTGGCTGCGTGAGTCACGTCGGGCCTGGTTGTGGGGCCTGGGCATACCTTTGGTGATCGCGCTGGCCTGCCTGCTGCTGGGCGGCTGGGGCCTGCTGTTGCTGTTGATCTACCCACTGCAGGCGGTGCGCCTGGCGCGCCGCGGCG  >  NC_002947/3553043‑3553187

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.