| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 3691992 = | 64 (1.130) | 4 (0.070) | 4/250 | NT | 6.4% | coding (594/756 nt) | PP_3258 | hypothetical protein |
| ? | NC_002947 | 3692039 = | 56 (1.030) | coding (547/756 nt) | PP_3258 | hypothetical protein | |||||
GCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3692141‑3691992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGGGTGAGGTGACGGG > NC_002947/3692039‑3692185 GCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCC < 3:161362/149‑1 TCTGGGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAG > 5:301341/1‑148 TCTGGGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAG < 6:301341/148‑1 GGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGC > 6:84882/1‑149 CGCCTGCCATGGCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGG < 5:84882/149‑1 GCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGGGTGAGGTGACG < 4:12070/149‑1 GCCCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGGGTGAGGTGACG > 6:369584/1‑149 CCAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGGGTGAGGTGACGGG > 7:301852/1‑149 GCCACCTGGCGCAGTGACGGTCATTGCGATCACGAGGCCGTCGGCCGCGCCGCTGCGCAGGCGGCGGCAACCCGTGGGGTGCACTTGGCTGAGGTACCGGTCTGGGCCTGGCACTGGGCTGAGCCTGACGACCCGCGCCTGCCATGGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/3692141‑3691992‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ggcccAGACCGGTACCTCAGCCAAGTGCACCCCACGGGTTGCCGCCGCCTGCGCAGCGGCGCGGCCGACGGCCTCGTGATCGCAATGACCGTCACTGCGCCAGGTGGCCATCAGCAGGTCATCGGCGCGCAGTAACTGGGTGAGGTGACGGG > NC_002947/3692039‑3692185 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |