New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	3803565 =	56 (0.990)	7 (0.130)	4/250	NT	12.3%	coding (352/3048 nt)	PP_3361	aminotransferase
	?	NC_002947	3803631 =	46 (0.840)					coding (286/3048 nt)	PP_3361	aminotransferase

TCAAACCGCGCTACTCGATCACCTGGCCGTGCATGGCGCGCATTTGGGCGTGCCACACCTGCGGGCCAGCGTGACGGGCGACTACCTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3803716‑3803565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGACGATTTTCAGTATCCAGCCTGCATC  >  NC_002947/3803631‑3803775                                                                                                                                                                                                                                                                                                                 TCAAACCGCGCTACTCGATCACCTGGCCGTGCATGGCGCGCATTTGGGCGTGCCACACCTGCGGGCCAGCGTGACGGGCGACTACCTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CG                                                                                                                                                      >  1:184992/1‑149  CAAACCGCGCTACTCGATCACCTGGCCGTGCATGGCGCGCATTTGGGCGTGCCACACCTGCGGGCCAGCGTGACGGGCGACTACCTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CG                                                                                                                                                      <  3:333644/148‑1                                                                                 ACTACCTGGCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGC                                                                      >  1:79952/1‑149                                                                                      CTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCG                                                                            <  7:60431/138‑1                                                                                      CTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCG                                                                            >  8:60431/1‑138                                                                                               GTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGCCACAGACGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAG                                                                                                                       <  1:189882/92‑1                                                                                               GTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGCCACAGACGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAG                                                                                                                       >  2:189882/1‑92                                                                                                     AGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGCCACAGACGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTC                                                        >  4:29646/1‑149                                                                                                                              TGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGA                           <  2:79952/147‑1                                                                                                                                                    cacattaGGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGACGATTTTCAGTATCCAGC         <  4:333644/142‑1                                                                                                                                                           GGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGACGATTTTCAGTATCCAGCCTGCATC  >  1:331927/1‑149                                                                                                                                                           GGCAGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGACGATTTTCAGTATCCAGCCTGCATC  >  7:215147/1‑149                                                                                                                                                                                                                                                                                                                 TCAAACCGCGCTACTCGATCACCTGGCCGTGCATGGCGCGCATTTGGGCGTGCCACACCTGCGGGCCAGCGTGACGGGCGACTACCTGCCGTCTGTGGCCAGCAGCACCGGTGAACAGCACGCTGTGCGCCTGGTCAGCTGGCTGGC‑‑‑‑‑‑CGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_002947/3803716‑3803565 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaGGTAGTCGCCCGTCACGCTGGCCCGCAGGTGTGGCACGCCCAAATGCGCGCCATGCACGGCCAGGTGATCGAGTAGCGCGGTTTGAAACTCGCTTTCTACCCTGGGCTCGCTGGCATTGACGATTTTCAGTATCCAGCCTGCATC  >  NC_002947/3803631‑3803775

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.