New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4062405	54 (0.950)	6 (0.110)	6/246	NT	9.2%	coding (1934/2088 nt)	PP_3581	membrane protein
	?	NC_002947	= 4062441	68 (1.270)					coding (1898/2088 nt)	PP_3581	membrane protein

CCCGCAGCAGTGAGTTCCGGGCCCATGGCCTGCAACTTGCTCATGAACTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4062255‑4062405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaaTCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCATGA  <  NC_002947/4062441‑4062295                                                                                                                                                                                                                                                                                                            CCCGCAGCAGTGAGTTCCGGGCCCATGGCCTGCAACTTGCTCATGAACTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGG                                                                                                                                                        >  5:285990/1‑148  CCGCAGCAGTGAGTTCCGGGCCCATGGCCTGCAACTTGCTCATGAACTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGC                                                                                                                                                       >  8:249521/1‑148                                         TCATGAACTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTT                                                                                                               >  3:165964/1‑149                                                CTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGG                                                                                                        <  7:249521/149‑1                                                 TGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGA                                                                                                          <  1:132008/146‑1                                                 TGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGA                                                                                                          >  2:132008/1‑146                                                   CTCGGCCGGCCCGGGCTGGCCCAGCAGGTAGCCCAGCAACGAGGCACATCCCAGCCGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGGTGCCGAGGG                                                                                                       <  1:344283/147‑1                                                   CTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGG                                                                                                      <  4:165964/148‑1                                                                                                                                                   GGCAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCA     >  8:240978/1‑149                                                                                                                                                     CAATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCATG   <  2:31100/149‑1                                                                                                                                                      AATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCATGA  <  5:268364/149‑1                                                                                                                                                      AATCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCATGA  <  7:125790/149‑1                                                                                                                                                                                                                                                                                                            CCCGCAGCAGTGAGTTCCGGGCCCATGGCCTGCAACTTGCTCATGAACTGCTCGGCCGGCACGGGCTGGCCCAGCAGGTAGCCCTGCAACGAGTCACATCCCAGACGGGTCAGGAAGTCCTGCTGCTTGTCGGTTTCAACCCCCTCGGCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4062255‑4062405 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcaaTCGTCGCACTGGGCCAGGCGTTGGGCCTGCGTATCGTTGCCGAGGGGGTTGAAACCGACAAGCAGCAGGACTTCCTGACCCGTCTGGGATGTGACTCGTTGCAGGGCTACCTGCTGGGCCAGCCCGTGCCGGCCGAGCAGTTCATGA  <  NC_002947/4062441‑4062295

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.