| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4233272 = | 62 (1.090) | 3 (0.060) | 3/244 | NT | 5.2% | coding (411/462 nt) | PP_5626 | repressor‑like DNA‑binding domain‑containing protein |
| ? | NC_002947 | 4233307 = | 52 (0.980) | coding (446/462 nt) | PP_5626 | repressor‑like DNA‑binding domain‑containing protein | |||||
GAGCAAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4233425‑4233272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcatcGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCATCAAAGCCTTTGG > NC_002947/4233307‑4233453 GAGCTAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTG < 7:9111/149‑1 GCAAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGGC < 1:224544/149‑1 GCAAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGG > 3:250778/1‑148 AAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGGCAT < 8:118589/149‑1 GGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTG > 5:25166/1‑124 GGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTG < 6:25166/124‑1 TCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGG > 5:227854/1‑106 TCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGG < 6:227854/106‑1 CGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGGCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCAGCAAACAGCACC > 1:323786/1‑148 ATGCCAGAGACGTCGTAGCGTGCTCGCTGGCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCC > 7:262453/1‑128 ATGCCAGAGACGTCGTAGCGTGCTCGCTGGCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCC < 8:262453/128‑1 TGGCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCATCAAAGCC > 6:169081/1‑149 GCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGT < 6:227115/77‑1 GCATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGT > 5:227115/1‑77 ATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCATCAAAGCCTTTG < 6:10792/149‑1 ATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCAT > 7:250196/1‑138 ATCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCAT < 8:250196/138‑1 TCGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCATCAAAGCCTTTGG < 7:95070/149‑1 GAGCAAAGCTCGGTGCTGTTTGATGGGGAGTGAACCTGAGCAGGTCTACAGCCAAACCGAGCAGCCCTGAGCTTTCAGTAAGCCAGCTTGTGCCTTCCTCCCTCAGCCTTCCACCGATCGATGCCAGAGACGTCGTAGCGTGCTCGCTGGCATC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4233425‑4233272‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctggcatcGATCGGTGGAAGGCTGAGGGAGGAAGGCACAAGCTGGCTTACTGAAAGCTCAGGGCTGCTCGGTTTGGCTGTAGACCTGCTCAGGTTCACTCCCCATCAAACAGCACCGAGCTTTGCTCTTTCAATCAAGAGCATCAAAGCCTTTGG > NC_002947/4233307‑4233453 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |