New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | 4633435 = | 56 (0.990) | 3 (0.060) | 3/244 | NT | 5.6% | coding (1676/1824 nt) | uvrC | UvrABC system protein C |
? | NC_002947 | 4633496 = | 49 (0.920) | coding (1615/1824 nt) | uvrC | UvrABC system protein C |
GAACGATGTGCATCACGAATTCACCCTCAAGGGCGATTCATCGGCGTTGCACCTGATCCAGCAGATCCGCGACGAAGCCCACCGCTTCGCTATCACCGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4633590‑4633435 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGCCACACCC > NC_002947/4633496‑4633641 GAACGATGTGCATCACGAATTCACCCTCAAGGGCGATTCATCGGCGTTGCACCTGATCCAGCAGATCCGCGACGAAGCCCACCGCTTCGCTATCACCGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATG > 6:66662/1‑149 TGTGCATCACGAATTCACCCTCAAGGGCGATTCATCGGCGTTGCACCTGATCCAGCAGATCCGCGACGAAGCCCACCGCTTCGCTATCACCGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCG < 8:5999/149‑1 ACCGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCA > 6:51177/1‑149 CGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTAGTGATGCAC > 5:7917/1‑148 GCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTC < 5:51177/149‑1 GCCTGTGATAGCGAAGCGGTGGGCTTCGTCGCGTATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGC < 3:168753/144‑1 GCCGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGCCACAC < 2:146761/149‑1 GCCGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGCCACA < 2:234542/148‑1 CGGTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGCCACAaca > 1:89914/1‑146 GAACGATGTGCATCACGAATTCACCCTCAAGGGCGATTCATCGGCGTTGCACCTGATCCAGCAGATCCGCGACGAAGCCCACCGCTTCGCTATCACCGGCCACCGGGCCCGTCGTGGCAAGGCTCGTCGAGTCTCCAGCCTTGAAGATGTGGCCGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4633590‑4633435 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtggccggTGATAGCGAAGCGGTGGGCTTCGTCGCGGATCTGCTGGATCAGGTGCAACGCCGATGAATCGCCCTTGAGGGTGAATTCGTGATGCACATCGTTCAGGTACAGGGTTTCGAAACCCGCCTTGCGTGTGACGCCCTTGGCCACACCC > NC_002947/4633496‑4633641 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |