| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4733550 = | 58 (1.020) | 4 (0.070) | 3/246 | NT | 7.2% | coding (2085/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 |
| ? | NC_002947 | 4733587 = | 49 (0.910) | coding (2048/2832 nt) | sucA | 2‑oxoglutarate dehydrogenase subunit E1 | |||||
CCTACATTCCGTTGCAGAACCTGTTCCCAGGCCAGCCACGTTTCGATCTGTACGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733698‑4733550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcggcATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCGT > NC_002947/4733587‑4733731 CCTACATTCCGTTGCAGAACCTGTTCCCATGCAAGCCACGTTTCGATCTGTTCGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC < 8:149402/149‑1 CATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATG > 1:240248/1‑148 ATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAAC > 3:332642/1‑93 ATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAAC < 4:332642/93‑1 ATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGCATGGTGGTGGAGTAGCCGAATTCGAAGGCCAGTACAGCTTCCTAGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACTGAATG > 1:214982/1‑147 gtCATGGTGGTGGAGTAGCCGTATTCGAAGTCCAGTACCGCTTACTCGGAAAGGAACTAATCGTACATATCTAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGTAATGTAGGTGATGGCGTCCTTCTGGTTGTTCAACACAGCGT > 1:54829/3‑148 CCTACATTCCGTTGCAGAACCTGTTCCCAGGCCAGCCACGTTTCGATCTGTACGATTCGTTCCTGTCCGAGGAAGCGGTACTGGCCTTCGAATACGGCTACTCCACCACCATGCCGAACGCGCTGGTGATCTGGGAAGCCCAGTTCGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4733698‑4733550‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttcggcATGGTGGTGGAGTAGCCGTATTCGAAGGCCAGTACCGCTTCCTCGGACAGGAACGAATCGTACAGATCGAAACGTGGCTGGCCTGGGAACAGGTTCTGCAACGGAATGTAGGTGCTGGCGTCCTTCTGGTTGTGCAACACCGCGT > NC_002947/4733587‑4733731 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |