New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 4770607 | 44 (0.780) | 4 (0.070) | 4/250 | NT | 7.1% | coding (8660/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
? | NC_002947 | = 4770649 | 62 (1.140) | coding (8618/10413 nt) | pvdD | non‑ribosomal peptide synthetase |
GTACCTATTGGCGCATAGACCGCGCCGCAAGGCTGCTGTGGCGCGGCTTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4770457‑4770607 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGCAGGCCAGCTATGAACAGGCGCATGCCTACTTGCAGCCGCAGTACATCATCAATGGCTATGGGCCGACCGAAACCGTGGTTACCCCGACGATCTGGAAA < NC_002947/4770649‑4770504 GTACCTATTGGCGCATAGACCGCGCCGCAAGGCTGCTGTGGCGCGGCTTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGG > 7:52015/1‑149 GCGCATAGACCGCGCCGCAAGGCTGCTGTGGCGCGGCTTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCAGC‑C‑‑Ctag > 7:28971/1‑145 GCGCGGCTTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCACCGCATCACCGCCGATGCGCATCTATTGCTTCGGCGGT < 6:320912/149‑1 TTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCAAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGC > 7:95285/1‑149 CAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCAAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGC < 8:95285/148‑1 GATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCAAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGCAGG < 8:52015/149‑1 GGCAAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGCAGGCCAGCTATGAACAGGCGCGTGCCTACTTGCAGCCGCAGTACATCATCAATGGCTATGGGCCGACCGAAACCGTGGTTACCCCGACGATCTGGA > 7:313743/1‑148 GGCAAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGCAGGCCAGCTATGAACAGGCGCATGCCTACTTGCAGCCGCAGTACATCATCAATGGCTATGGGCCGACCGAAACCGTGGTTACCCCGA < 4:184965/139‑1 GCAAC‑C‑‑CACCGCCGATGCGAATCTATTGCTTCGGCGGTGATGCGGTGCCTCAGGCCAGCTATGAACAGTCGCATGCCTACTTGCATCCGCAGTACATCATCTATGGCTATGGGCCGACCGAAACCGTGGTTACCCCGACGATCTGGAAA < 7:229988/149‑1 GTACCTATTGGCGCATAGACCGCGCCGCAAGGCTGCTGTGGCGCGGCTTTCCAGATCGTCGGGGTAACCACGGTTTCGGTCGGCCCATAGCCATTGATGATGTACTGCGGCTGCAAGTAGGCATGCGCCTGTTCATAGCTGGCCTGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/4770457‑4770607 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cggcaAC‑C‑‑CACCGCCGATGCGCATCTATTGCTTCGGCGGTGATGCGGTGCCGCAGGCCAGCTATGAACAGGCGCATGCCTACTTGCAGCCGCAGTACATCATCAATGGCTATGGGCCGACCGAAACCGTGGTTACCCCGACGATCTGGAAA < NC_002947/4770649‑4770504 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |