New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4890632	56 (0.990)	4 (0.080)	4/240	NT	6.3%	intergenic (+32/‑207)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase
	?	NC_002947	= 4890694	67 (1.280)					intergenic (+94/‑145)	glxR/ttuD	2‑hydroxy‑3‑oxopropionate reductase/hydroxypyruvate reductase

TCCAATGCCCAGCAAGTGTTCAACACCTGCCAGGCCCTGGGCGGCGGCAACTGGGACCACTCGGCGCTGATCAAAGGCCTGGAGCACATGGCCAACTTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4890481‑4890632 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgcgggCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGTTGGCCATGTGCTCCAGGCCTTTGATCAG  <  NC_002947/4890694‑4890547                                                                                                                                                                                                                                                                                                              TCCAATGCCCAGCAAGTGTTCAACACCTGCCAGGCCCTGGGCGGCGGCAACTGGGACCACTCGGCGCTGATCAAAGGCCTGGAGCACATGGCCAACTTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGC                                                                                                                                                         >  3:209376/1‑149                   TTCAACACCTGCCAGGCCCTGGGCGGCGGCAACTGGGACCACTCGGCGCTGATCAAAGGCCTGGAGCACATGGCCAACTTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGGCAAGCCCGCTCCTA                                                                                                                                        >  3:290851/1‑148                                                               GGCGCTGATCAAAGGCCTGGAGCACATGGCCAACTTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGG                                                                                            <  4:290851/148‑1                                                                                                 TTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGGCAAGCCCGCTCCTACATGCTCAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAA                                                                                <  1:86535/126‑1                                                                                                 TTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAA                                                                                >  2:86535/1‑126                                                                                                                                                CTTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGTTGGCCATGTGCTCCAGGC            <  7:57326/147‑1                                                                                                                                                 TTCGCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGT                              <  8:32920/128‑1                                                                                                                                                    GCGGGCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGTTGGCCATGTGCTCCAGGCCTTTG       <  7:81234/148‑1                                                                                                                                                        GCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTGTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGTTGGCCATGTGCTCCAGGCCTTTGATCAG  <  5:229409/149‑1                                                                                                                                                                                                                                                                                                              TCCAATGCCCAGCAAGTGTTCAACACCTGCCAGGCCCTGGGCGGCGGCAACTGGGACCACTCGGCGCTGATCAAAGGCCTGGAGCACATGGCCAACTTCTCGATCCGCGACGACAAATAAATCGTTTTTAGCCTCACTGGCCTCTTCGCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4890481‑4890632 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcttcgcgggCAAGCCCGCTCCTACATGCACAGCTCTGAGCGATTGTGCGGTCTTTGGTAGGAGCGGGTTTACCCGCGAAGAGGCCAGTGAGGCTAAAAACGATTTATTTGTCGTCGCGGATCGAGAAGTTGGCCATGTGCTCCAGGCCTTTGATCAG  <  NC_002947/4890694‑4890547

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.