New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4891740	67 (1.180)	4 (0.080)	4/244	NT	6.5%	coding (902/1275 nt)	ttuD	hydroxypyruvate reductase
	?	NC_002947	= 4891803	52 (0.980)					coding (965/1275 nt)	ttuD	hydroxypyruvate reductase

TCGCCAAACCCCAGCAGTCGCTGGAGGCTGCCGCGGTCAAAGCCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4891590‑4891740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggccaTTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGCCACTTCGCGCGATTCACCTTCCAGGTCGCCGAGAA  <  NC_002947/4891803‑4891659                                                                                                                                                                                                                                                                                                          TCGCCAAACCCCAGCAGTCGCTGGAGGCTGCCGCGGTCAAAGCCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGC                                                                                                                                                     >  8:250339/1‑149                                 GCGGTCAAAGCCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGG                                                                                                                                                      <  1:26040/116‑1                                 GCGGTCAAAGCCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGG                                                                                                                                                      >  2:26040/1‑116                                           CCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGA                                                                                                           >  3:225986/1‑149                                                                          CGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGT                                                                             <  4:225986/148‑1                                                                                 CTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAA                                                                       <  4:53862/147‑1                                                                                 CTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCATTGCCGCGCACGGTCACGGTGGTTACGCCACCCGACAGGATCACGCAGGGAGCTTTGAGCGGCTGGCCGTGTTGAAC                                                                      >  3:53862/1‑148                                                                                                                                                CACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGCCACTTCGCGCGATTCACCTTCCAGGTCGCC       >  3:298810/1‑148                                                                                                                                                CACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGC                                     >  7:145601/1‑118                                                                                                                                                CACGGCCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGC                                     <  8:145601/118‑1                                                                                                                                                     CCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGCCACTTCGCGCGATTCACCTTCCAGGTCGCCGAGAA  >  8:5484/1‑148                                                                                                                                                     CCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCG                                                             >  7:202266/1‑89                                                                                                                                                     CCATTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCG                                                             <  8:202266/89‑1                                                                                                                                                                                                                                                                                                          TCGCCAAACCCCAGCAGTCGCTGGAGGCTGCCGCGGTCAAAGCCCGTCAGGCCGGTTTCAGCCCGCTGATTCTCGGCGACCTGGAAGGTGAATCGCGCGAAGTGGCCAAGGTGCATGCCGGTATCGCCCGGCAAATCGTTCAACACGGCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/4891590‑4891740 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cacggccaTTGCCGCGCACGGTCACGGTGGTTTCGCCACCCGACAGGATCACGCAGGGCGCTTTGAGCGGCTGGCCGTGTTGAACGATTTGCCGGGCGATACCGGCATGCACCTTGGCCACTTCGCGCGATTCACCTTCCAGGTCGCCGAGAA  <  NC_002947/4891803‑4891659

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.