| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 4999641 = | 56 (0.990) | 4 (0.070) | 4/248 | NT | 6.4% | coding (494/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter |
| ? | NC_002947 | 4999711 = | 64 (1.180) | coding (564/1383 nt) | PP_4407 | gamma‑aminobutyrate transporter | |||||
TTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4999789‑4999641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccaTGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG > NC_002947/4999711‑4999856 TTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCC > 7:95322/1‑147 TCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGC > 8:243560/1‑149 GGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAA > 6:327912/1‑149 TTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTG < 7:243560/149‑1 GGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGA < 5:327912/149‑1 CGCCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTTATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGA < 6:20371/149‑1 CCCATGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGC < 2:156515/149‑1 CCATGACTGCTTCATGCCCAACGTCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG < 6:270221/149‑1 TTCGCTGCCGCCCAGGGAGAAAATCACCACGATAACGCCGGCCATCACCGGTGACAGGCCGTTGGGCATGAAGCCGTCATGGGCGGTGAGGTTGATCAGGCCTGGGGCGGGAATATCACTGTGCAGGCCGAGCAGGATCGAGACGCCCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/4999789‑4999641‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccaTGACGGCTTCATGCCCAACGGCCTGTCACCGGTGATGGCCGGCGTTATCGTGGTGATTTTCTCCCTGGGCGGCAGCGAAATTGCCGCTGTGGCCGCGGGTGAATCAGAGAACCCCCGACAGAACGTGATCCGCGCGATCAAGAGCG > NC_002947/4999711‑4999856 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |