| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5036579 = | NA (NA) | 3 (0.060) | 3/242 | NT | NA | coding (70/336 nt) | PP_4442 | transposase |
| ? | NC_002947 | 5036653 = | NA (NA) | coding (144/336 nt) | PP_4442 | transposase | |||||
CGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGTTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5036735‑5036579‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggccaaCCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGGTTTG > NC_002947/5036653‑5036800 CGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGTTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACC > 3:86515/1‑149 CGGTTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTT > 5:133466/1‑149 GTTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAACCGGATGAAGGTGCTGGTGCACGCCGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTT > 1:120849/1‑148 AGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGG < 6:133466/149‑1 ctGGGCCAACCGGATGAATGTGATGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCTGCATTCGACATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCACGCGATGGTA > 8:248811/3‑148 CCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTAC > 3:174021/1‑149 CCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTC > 7:107207/1‑98 CCGGGCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTC < 8:107207/98‑1 GCCAACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGG < 7:243476/149‑1 AACCGGATGAAGGTGCTGGTGCACGACGGCGGGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGGTTT < 8:91057/149‑1 ACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGAGGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGGTTTG > 1:276698/1‑149 ACCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTCGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGGTTTG > 8:208498/1‑149 CGGGCCAGTGAAACTTGCCTTGATTCAGTCGTCGCGCTGCAAGCCAGACGCCCACGCCGTCGTGCACCAGCACCTTCATCCGGTTGGCCCGGCGATTGGCGAACAGATAAGCGCAGTGCGGCTTCGCCGCACCGAACACCGCGATCACCCGGGCCAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5036735‑5036579‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccgggccaaCCGGATGAAGGTGCTGGTGCACGACGGCGTGGGCGTCTGGCTTGCAGCGCGACGACTGAATCAAGGCAAGTTTCACTGGCCCGGCATTCGCCATGGCAGCGAGGTCGAACTCGACAGCGAACAACTCCAGGCGTTGGTACTGGGTTTG > NC_002947/5036653‑5036800 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |