| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5649951 | 44 (0.780) | 5 (0.090) | 5/254 | NT | 10.3% | coding (1242/2127 nt) | PP_4959 | diguanylate cyclase |
| ? | NC_002947 | = 5649985 | 44 (0.790) | coding (1208/2127 nt) | PP_4959 | diguanylate cyclase | |||||
TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5649832‑5649951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGGCCTGCTGCGTTCGGCCGATGCAGCAATGTACGCAGCCAAGCAAGCGGGGCGTCAGCAATACCGCTTCTACGACCAGGAACTCAACGGACGGGCGCGCTCGCGATTGAT < NC_002947/5649985‑5649838 TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTC > 1:291269/1‑119TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTC < 2:291269/119‑1 CAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCG > 6:3579/1‑148 ATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAG < 2:102834/149‑1 TCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGG < 5:3579/149‑1 CCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGGCCT > 7:288484/1‑141 CCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCGGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGGCCT < 8:288484/141‑1 GGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGGCCTGCTGCGTTCGGCCGATGCAGCAATGTACGCAGCCAAGCAAGCGGGGCGTCAGCAATACCGCTTCTACGACCAGGAACTCAACGGACGGGCGCGCTCGCGATTGAT < 2:54698/149‑1 TCGAGCATCAATCGCGAGCGCGCCCGTCCGTTGAGTTCCTGGTCGTAGAAGCGGTATTGCTGACGCCCCGCTTGCTTGGCTGCGTACATTGCTGCATCGGCCGAACGCAGCAGGCCTTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5649832‑5649951‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcgGCATTGCCACCTACCCGGACTGTGGCGCCAATGTCGAAGGCCTGCTGCGTTCGGCCGATGCAGCAATGTACGCAGCCAAGCAAGCGGGGCGTCAGCAATACCGCTTCTACGACCAGGAACTCAACGGACGGGCGCGCTCGCGATTGAT < NC_002947/5649985‑5649838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |