| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | = 5697607 | 70 (1.240) | 4 (0.070) | 4/252 | NT | 5.8% | coding (241/1344 nt) | hslU | protease HslVU ATPase subunit |
| ? | NC_002947 | = 5697644 | 63 (1.150) | coding (278/1344 nt) | hslU | protease HslVU ATPase subunit | |||||
CGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5697457‑5697607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGTCTTGCCGACGCCGGTAGGGCCGATCATCAGGATGTTTTTGGGGGTGACTTCGGCAC < NC_002947/5697644‑5697497 CGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGG < 2:195982/148‑1 GCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTC < 1:287060/149‑1 AACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTC > 4:294013/1‑147 AACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTC > 7:129146/1‑147 CCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCGCGGCCCACGTAGCCCACTTCGGTGAACTT > 8:266112/1‑149 CGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCGCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACC < 7:266112/149‑1 CCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCGCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCT < 1:160326/135‑1 CCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCGCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCT > 2:160326/1‑135 CGCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGTCTTGCCGACGCCGGTAGGGCCGATCATCAGGATGTTTTTGGGGGTGACTTCGGCA < 5:334740/149‑1 GCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGTCTTGCCGACGCCGGTAGGGCCGATCATCAGGATGTTTTTGGGGGTGACTTCGGCAC > 7:118320/1‑149 GCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGT > 5:322649/1‑93 GCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGT < 6:322649/93‑1 CGCAACCGCTGGCGGCGCATGCAGCTCCCTGCCGAGCTGCGTGCCGAAGTCACCCCCAAAAACATCCTGATGATCGGCCCTACCGGCGTCGGCAAGACCGAAATCGCCCGCCGGCTGGCCAAACTGGCCAACGCGCCGTTCCTCAAGGTCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_002947/5697457‑5697607‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtcgCGGCCCACGTAGCCCACTTCGGTGAACTTGGTGGCCTCGACCTTGAGGAACGGCGCGTTGGCCAGTTTGGCCAGCCGGCGGGCGATTTCGGTCTTGCCGACGCCGGTAGGGCCGATCATCAGGATGTTTTTGGGGGTGACTTCGGCAC < NC_002947/5697644‑5697497 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |