New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5739452	51 (0.900)	3 (0.060)	3/246	NT	5.6%	coding (382/1365 nt)	hutF	formiminoglutamate deiminase
	?	NC_002947	= 5739519	53 (0.990)					coding (449/1365 nt)	hutF	formiminoglutamate deiminase

TTTCTGGACCTGGCGAGACCTGATGTACCGCCTGGTCGGGCAGATCAGCCCAGAGCAGCTTCAGGTCATCGCCCGCCAGCTGTACATCGAGATGCTCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5739301‑5739452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCGTGGTGCACGTAGTGGAATTCGGCCACCGAGGTGTAGCCGGCCTTGAGCATCTCGATGTACAGCTGGCGGG  <  NC_002947/5739519‑5739372                                                                                                                                                                                                                                                                                                              TTTCTGGACCTGGCGAGACCTGATGTACCGCCTGGTCGGGCAGATCAGCCCAGAGCAGCTTCAGGTCATCGCCCGCCAGCTGTACATCGAGATGCTCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGG                                                                                                                                                         >  3:96591/1‑149                                                                               GCTGTACATCGAGATGCTCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGGCCGATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGG                                                                           <  6:35553/149‑1                                                                                                TCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGGCCGATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCG                                                                        >  7:13498/1‑135                                                                                                TCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGGCCGATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCG                                                                        <  8:13498/135‑1                                                                                                                                                     GCCGATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCGTGGTGCACGTAGTGGAATTCGGCCACCGAGGTGTAGCCGGCCTTGAGCATCTCGATGTACAGCTGGC     >  5:268899/1‑149                                                                                                                                                       CGATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCGTGGTGCACGTAGTGGAATTCGGCCACCGAGGTGTAGCCGGCCTTGAGCATCTCGATGTACAGCTGGCGG   <  5:304494/149‑1                                                                                                                                                        GATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCGTGGTGCACGTAGTGGAATTCGGCCACCGAGGTGTAGCCGGCCTTGAGCATCTCTATGTACAGCTGGCGGG  <  8:110111/149‑1                                                                                                                                                                                                                                                                                                              TTTCTGGACCTGGCGAGACCTGATGTACCGCCTGGTCGGGCAGATCAGCCCAGAGCAGCTTCAGGTCATCGCCCGCCAGCTGTACATCGAGATGCTCAAGGCCGGCTACACCTCGGTGGCCGAATTCCACTACGTGCACCACGACCAGGCCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/5739301‑5739452 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggccgATGCCGCTGTCGGCTGCGGCCGCGCTAATGCGTCGCGACAGCTCGGCCGGGTCGGCGTAGGGCTTGCCGGCCTGGTCGTGGTGCACGTAGTGGAATTCGGCCACCGAGGTGTAGCCGGCCTTGAGCATCTCGATGTACAGCTGGCGGG  <  NC_002947/5739519‑5739372

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.