| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 5834478 = | 66 (1.160) | 3 (0.050) | 3/252 | NT | 5.3% | coding (756/1491 nt) | PP_5113 | Zn‑dependent peptidase |
| ? | NC_002947 | 5834528 = | 44 (0.800) | coding (806/1491 nt) | PP_5113 | Zn‑dependent peptidase | |||||
GTCTGCTTGGACGGGAAGTCGATGTGGGTCAGGCCGGCCTTGGCGTCTGCGGGTTGGGCCGGTGCGGCCAGCGCAGGGCCCTTGGGCAGGCCGGCAGACACCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5834627‑5834478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTCCCGTCCAAGCAGACCCACCTGATGCTGGCCGAACTGGGGATCGACCGCCAGGACCCGGACTG > NC_002947/5834528‑5834675 GTCTGCTTGGACGGGAAGTCGATGTGGGTCAGGCCGGCCTTGGCGTCTGCGGGTTGGGCCGGTGCGGCCAGCGCAGGGCCCTTGGGCAGGCCGGCAGACACCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAG > 6:136658/1‑149 TCTGCTTGGACGGGAAGTCGATGTGGGTCGGGGCGGCGTTGGCGTCTGCGGGTTGGGCCGGTGCGGCCAGCGCAGGGCCCTTGTGCAGGCCGGCAGACACGTGTGCGGCGATGGCTTCGGGCTCTGCACGGCTGAGGTCGCCGACCAGG < 7:87615/149‑1 TCTGCTTGGACGGGAAGTCGATGTGGGTCAGGCCGGCCTTGGCGTCTGCGGGTTGGGCCGGTGCGGCCAGCGCAGGGCCCTTGGGCAGGCCGGCAGACACCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCACCGACCAGG < 3:183075/149‑1 ACCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAGGTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTCCCGTCCAAG > 3:122928/1‑146 CCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAGGTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTC > 3:6760/1‑136 CCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAGGTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTC < 4:6760/136‑1 GTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTCCCGTCCAAGCAGACCCACCTGATGCTGGCCGAACTGGGGATCGACCGCCAGGACCCGGACTG < 4:129541/149‑1 GTCTGCTTGGACGGGAAGTCGATGTGGGTCAGGCCGGCCTTGGCGTCTGCGGGTTGGGCCGGTGCGGCCAGCGCAGGGCCCTTGGGCAGGCCGGCAGACACCTGTGCGGCGATGGCTTCGGCCTCTGCACGGCTGAGGTCGCCGACCAGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/5834627‑5834478‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑caggTGTCTGCCGGCCTGCCCAAGGGCCCTGCGCTGGCCGCACCGGCCCAACCCGCAGACGCCAAGGCCGGCCTGACCCACATCGACTTCCCGTCCAAGCAGACCCACCTGATGCTGGCCGAACTGGGGATCGACCGCCAGGACCCGGACTG > NC_002947/5834528‑5834675 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |