| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 6087874 = | 55 (0.970) | 5 (0.090) | 4/248 | NT | 8.7% | coding (96/1044 nt) | aphA | acetylpolyamine aminohydrolase |
| ? | NC_002947 | 6087918 = | 53 (0.980) | coding (140/1044 nt) | aphA | acetylpolyamine aminohydrolase | |||||
GGCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTCGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAACGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088025‑6087874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGGGCCAAGAGGGTGACCTGCTGCCCTTCACCTGGCCGGCCCGC > NC_002947/6087918‑6088063 GGCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTCGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAACGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCTGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGT < 8:181787/147‑1GGCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTCGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAACGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGT < 6:15329/147‑1GGCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTAGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAAAGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCCGAGCGTGCGTTTTTTCACCTGGTCGAGCACATGGTCG > 6:228157/1‑149 GCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTCGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAACGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGG > 6:217318/1‑149 TCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTG > 4:328623/1‑149 TCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTG > 6:161560/1‑149 CGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGG > 8:253158/1‑149 GCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGG < 5:161560/148‑1 TTTTCACCTGGTCGAGCACATGGTCGGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGGGCCAAGAGGGTGAC < 7:253158/148‑1 GGCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGTTTTTCTTCGAAGGCGCCTGTGCCCGCTGGGCTGCGCTGGGCCAAGAGGGTGACCTGCTGCCCTTCACCTGGCCGGCC < 3:79248/147‑1 GCGACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGGGCCAAGAGGGTGACCTGCTGCCCTTCACCTGGCCGGCCCGC < 4:318034/149‑1 GGCCCAGCGCAGCCCAGCGGGCCCAGGCGCCTTCGAAGAAATCCAGGTAATCGGCGCTGTGGACGCGCAACAACGGCGCACGGCCGAAGTCGGTCGGGCCCTGGATGTCGCCGAGCTTGCGTTTTTTCACCTGGTCGAGCACATGGTCGGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_002947/6088025‑6087874‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcgACATCCAGGGCCCGACCGACTTCGGCCGTGCGCCGTTGTTGCGCGTCCACAGCGCCGATTACCTGGATTTCTTCGAAGGCGCCTGGGCCCGCTGGGCTGCGCTGGGCCAAGAGGGTGACCTGCTGCCCTTCACCTGGCCGGCCCGC > NC_002947/6087918‑6088063 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |