New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 6101324	61 (1.080)	4 (0.070)	4/250	NT	6.1%	coding (476/2187 nt)	uvrD	DNA‑dependent ATPase I/helicase II
	?	NC_002947	= 6101342	65 (1.190)					coding (494/2187 nt)	uvrD	DNA‑dependent ATPase I/helicase II

GACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6101200‑6101324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTC  <  NC_002947/6101342‑6101200                                                                                                                                                                                                                                                                              GACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGCCCCCCGCCTGGATATGCTGCGGGCGC                                                                                                                         <  2:234316/149‑1      CGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGC                                                                                                                                                   <  5:32702/118‑1      CGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGC                                                                                                                                                   >  6:32702/1‑118         CGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGCCCCCCGCCTGGATATGCTGCGGGCGCAGGCCTTC                                                                                                                 <  8:24870/149‑1            CCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGCCCCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTC                                                                                                              >  5:152406/1‑149                                                                                              ATCAACGGACAGAAAGACGAAGGCCTGCGCCCGCAGCATATCCAGGCGGGGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTT                             >  6:152406/1‑148                                                                                                                          GCCCCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTC  >  5:220187/1‑147                                                                                                                            CCCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTT                                                                 <  1:6440/82‑1                                                                                                                            CCCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTT                                                                 >  2:6440/1‑82                                                                                                                                                                                                                                                                              GACAGCGACGACCAGCAGCGCCTGATCAAGCGGGTCATGCGCGAGTTGGGCCTGGACGAGCAGAAGTGGCCGGCACGCCAGGCCCAATGGTTCATCAACGGACAGAAAGACGAAGGCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_002947/6101200‑6101324 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgcccCCCGCCTGGATATGCTGCGGGCGCAGGCCTTCGTCTTTCTGTCCGTTGATGAACCATTGGGCCTGGCGTGCCGGCCACTTCTGCTCGTCCAGGCCCAACTCGCGCATGACCCGCTTGATCAGGCGCTGCTGGTCGTCGCTGTC  <  NC_002947/6101342‑6101200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.