New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1235874 =	49 (0.860)	3 (0.060)	3/250	NT	6.1%	coding (315/852 nt)	glpF	aquaglyceroporin
	?	NC_002947	1235912 =	46 (0.840)					coding (277/852 nt)	glpF	aquaglyceroporin

AGAAACGCCTGGCTGGTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGAGGTAGATGGCCATG  >  NC_002947/1235731‑1236021                                                                                                                                                |                                                                                                                                                    aGAAACGCCTGGCTGGTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGtgctgc                                                                                                                                                <  6:166313/149‑1 (MQ=255)  gacaCGCCTGGCTGGTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTgcg                                                                                                                                               <  8:236143/146‑1 (MQ=255)  gAAACGCCTGGCTGGTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTgcg                                                                                                                                               >  5:265346/1‑149 (MQ=255)            gctggTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGaa                                                                                                                                       <  2:212819/147‑1 (MQ=255)                     cAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATa                                                                                                                            >  1:324590/1‑149 (MQ=255)                        cGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCt                                                                                                                         >  5:154502/1‑149 (MQ=255)                          aCGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTgg                                                                                                                       <  7:340883/149‑1 (MQ=255)                              gTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATgc                                                                                                                                    <  5:174223/132‑1 (MQ=255)                              gTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATgc                                                                                                                                    >  6:174223/1‑132 (MQ=255)                               tGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAg                                                                                                                  >  7:335980/1‑149 (MQ=255)                                gCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGc                                                                                                                 <  6:265346/149‑1 (MQ=255)                                   ggTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCACACCTGGGCCAGCATg                                                                                                              <  7:339859/149‑1 (MQ=255)                                   atggccatctacctcaccgccggtatttccggtgcgcacctgaacccagccgtgagtatcgccctcacactgttcgcagggttcgacaagcgcaagctgcccttctacaTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATg                                                                                                              >  1:109484‑M1/110‑149 (MQ=255)                                         tGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTgg                                                                                                                       >  2:342039/1‑134 (MQ=255)                                         tGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTgg                                                                                                                       <  1:342039/134‑1 (MQ=255)                                                  ccGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTg                                                                                               >  7:37897/1‑149 (MQ=255)                                                   cGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGt                                                                                                             >  8:263819/1‑134 (MQ=255)                                                   cGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGt                                                                                                             <  7:263819/134‑1 (MQ=255)                                                         cAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGt                                                                                        >  7:91042/1‑149 (MQ=255)                                                               cAGGCTGCCTTCGCTACCTCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAAc                                                                                   <  3:314840/148‑1 (MQ=255)                                                               cAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAAcc                                                                                  <  2:324590/149‑1 (MQ=255)                                                                  gCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTg                                                                               >  3:80036/1‑149 (MQ=255)                                                                        ttCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGaa                                                                           >  2:191534/1‑147 (MQ=255)                                                                        ttCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGaa                                                                           >  1:48212/1‑147 (MQ=255)                                                                           gCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGGTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAgtg                                                                      <  8:259193/149‑1 (MQ=255)                                                                               cccagccgtgagtatcgccctcacactgttcgcagggttcgacaagcgcaagctgcccttctacaTGCTGCGCCACAGAATGCGCCGAAAACCTGGGCCAGCATGTAg                                                                                                           <  4:313269‑M1/43‑1 (MQ=255)                                                                               cccagccgtgagtatcgccctcacactcttcgcagggttcgacaagcgcaagctgcccttctacaTGCTGCGCCACAGAATGCGCCGCATACCTCGGCCAGCATGTAg                                                                                                           >  3:313269‑M1/66‑108 (MQ=255)                                                                                cgcgCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAgg                                                                 >  4:349931/1‑149 (MQ=255)                                                                                 gcgcAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAggg                                                                >  5:106800/1‑149 (MQ=255)                                                                                 gcgcAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAggg                                                                <  4:80036/149‑1 (MQ=255)                                                                                           gCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCAc                                                      <  6:154502/149‑1 (MQ=255)                                                                                             gttggCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACgg                                                    <  8:335980/146‑1 (MQ=255)                                                                                             gTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACgg                                                    >  3:311599/1‑149 (MQ=255)                                                                                                 gCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTgg                                                <  8:91042/149‑1 (MQ=255)                                                                                                   tttttCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGAGCCACAGAATGCGCCGCATACCTTGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGt                                              >  6:367562/4‑149 (MQ=255)                                                                                                   ttGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGt                                              >  2:203848/1‑149 (MQ=255)                                                                                                      ttCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTc                                            <  4:311599/148‑1 (MQ=255)                                                                                                         gAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGt                                        >  5:219726/1‑149 (MQ=255)                                                                                                           aaTCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTg                                                 <  1:69789/138‑1 (MQ=255)                                                                                                           aaTCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTg                                                 >  2:69789/1‑138 (MQ=255)                                                                                                                   aaCAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCgg                               >  7:223570/1‑148 (MQ=255)                                                                                                                     cAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGaaa                            >  4:28242/1‑149 (MQ=255)                                                                                                                      aGATTGCTGTACAGCGTGTAGACCAGTGCTCCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGaaa                            >  1:30739/1‑148 (MQ=255)                                                                                                                       gATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGAAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACTGTGTGAGGGCGATACTCACGGCTCGGTTCAGGTGCGCACCGGAAATa                          >  8:285989/1‑149 (MQ=255)                                                                                                                        aTTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATAc                         >  6:288216/1‑149 (MQ=255)                                                                                                                             tGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACcggcg                    >  4:17256/1‑149 (MQ=255)                                                                                                                             tGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACcggcg                    >  1:32971/1‑149 (MQ=255)                                                                                                                                aCAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGt                  >  7:99482/1‑148 (MQ=255)                                                                                                                                 cAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGa                <  3:28242/149‑1 (MQ=255)                                                                                                                                 cAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGa                <  6:106800/149‑1 (MQ=255)                                                                                                                                 cAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGa                <  3:349931/149‑1 (MQ=255)                                                                                                                                    cGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGAGGt             <  3:17256/149‑1 (MQ=255)                                                                                                                                           aCCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGAGGTAGATGGc      <  5:288216/149‑1 (MQ=255)                                                                                                                                               gTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGAGGTAGATGGCCATg  <  2:32971/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                                    AGAAACGCCTGGCTGGTGGACAGCGACGGGTGCGGGTAGGTGGAGAACACCGAGGCCAGCTCCAGGCTGCCTTCGCTACCGCGCAGCATGGCGTGGGCTTGTTCGAAATCGAAGAACAGATTGCTGTACAGCGTGTAGACCAGTGCTGCGCCACAGAATGCGCCGCATACCTGGGCCAGCATGTAGAAGGGCAGCTTGCGCTTGTCGAACCCTGCGAACAGTGTGAGGGCGATACTCACGGCTGGGTTCAGGTGCGCACCGGAAATACCGGCGGTGAGGTAGATGGCCATG  >  NC_002947/1235731‑1236021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.