New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 1799873	53 (0.940)	5 (0.110)	5/214	NT	9.1%	intergenic (+43/‑144)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha
	?	NC_002947	= 1799915	56 (1.200)					intergenic (+85/‑102)	rnhB/dnaEA	ribonuclease HII/DNA polymerase III subunit alpha

GAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATG  >  NC_002947/1799726‑1800019                                                                                                                                                    |                                                                                                                                                   gAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGctct                                                                                                                                                   >  7:252761/1‑149 (MQ=255)    gCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTcac                                                                                                                                                <  2:138219/149‑1 (MQ=255)     cGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTcaca                                                                                                                                               <  6:59166/149‑1 (MQ=255)         ggCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGa                                                                                                                                            <  3:148541/148‑1 (MQ=255)                     gCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATTTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGa                                                                                                                               <  3:103742/149‑1 (MQ=255)                       cTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACTGGATTCATCGGTCTGAgc                                                                                                                             >  4:326138/1‑149 (MQ=255)                          cGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACTGGATTCATCGGTCTGAgcggc                                                                                                                          <  3:326138/149‑1 (MQ=255)                           gCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggcg                                                                                                                         >  2:119820/1‑149 (MQ=255)                           gCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAgcggcg                                                                                                                         >  4:300069/1‑149 (MQ=255)                             ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCggg                                                                                                                       <  3:300069/149‑1 (MQ=255)                             ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCggg                                                                                                                       <  4:39140/149‑1 (MQ=255)                             ccATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCAACGATTCCCTGATCTGACCTATTGGGGACGCTTCTCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATAGGTCTGAGCGGCggg                                                                                                                       >  4:317944/1‑149 (MQ=255)                               aTTCATCGGCGTACCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgat                                                                                                                     >  3:289767‑M1/1‑118 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGGTCTCCCAGGCTTGATCGGTCTGAGCGGCGGGGCGGTa                                                                                                                 >  3:295102/1‑149 (MQ=39)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAt                                                                                                                                           >  8:89133/1‑123 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGAt                                                                                                                                           <  7:89133/123‑1 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTa                                                                                                                 >  5:350198/1‑149 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATAGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                                                      <  2:232812/144‑1 (MQ=255)                                   aTCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATAGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCgggg                                                                                                                      >  1:232812/1‑144 (MQ=255)                                    tCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTATGAGCGGCGGGGCCGTAc                                                                                                                >  5:104963/1‑149 (MQ=255)                                             cTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGga                                                                                                        >  3:159570‑M2/1‑146 (MQ=255)                                             cTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGga                                                                                                        >  8:252761‑M2/1‑146 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtga                                                                                                          <  6:26407‑M1/145‑43 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtga                                                                                                          >  5:26407‑M1/1‑103 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATc                                                                                                                                      >  7:180587/1‑117 (MQ=255)                                              ttCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATc                                                                                                                                      <  8:180587/117‑1 (MQ=255)                                                cGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTTGCAGCCCTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcg                                                                                                     <  8:34081‑M1/148‑48 (MQ=255)                                                cGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagc                                                                                                      <  4:289767‑M1/147‑47 (MQ=255)                                                   cccGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcg                                                                                                 <  3:291682‑M2/149‑10 (MQ=255)                                                          cgggcggCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccg                                                                                           >  1:106238‑M2/1‑133 (MQ=255)                                                           gggcggCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGCGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgc                                                                                          <  8:35509‑M2/148‑17 (MQ=255)                                                             gcggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcg                                                                                         <  7:345651‑M2/147‑18 (MQ=255)                                                              cggcTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaag                                                                                      >  7:36634‑M2/1‑129 (MQ=255)                                                                          cgcgcgATGGCGTCACCTATTCCCTGATCTGACCTCTTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCCCCGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagca                                                                          <  8:100995/149‑1 (MQ=38)                                                                                     gTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaa                                                                >  5:39320/1‑148 (MQ=255)                                                                                      tCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                              <  8:345651/149‑1 (MQ=255)                                                                                       cACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGGGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAg                                                             <  5:371876/149‑1 (MQ=255)                                                                                        aCCGATTCCGTGATCTGACTTATTGGGGCCGCTTCGCGGCCGTTCGCGGGCACGCCCGCTCTCACAGCATTCTTCGGTCTGATCGGCGGGGCCGTACCTTTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGc                                                            <  4:295102/149‑1 (MQ=38)                                                                                                ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgg                                                                                                    >  3:71951‑M2/1‑95 (MQ=255)                                                                                                ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgg                                                                                                    <  4:71951‑M2/101‑7 (MQ=255)                                                                                                ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                              >  7:56346/1‑139 (MQ=255)                                                                                                ccTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCaaaaaaa                                                              <  8:56346/139‑1 (MQ=255)                                                                                                  tGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAGGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAg                                                  >  7:49860/1‑149 (MQ=255)                                                                                                    aTCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAg                                                  <  6:350198/147‑1 (MQ=255)                                                                                                     tCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGCGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAgg                                                 <  5:213181/147‑1 (MQ=255)                                                                                                     tCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAgg                                                 >  6:213181/1‑147 (MQ=255)                                                                                                         aCCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACaa                                           >  5:355307/1‑149 (MQ=255)                                                                                                         aCCTATTGCGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACa                                            <  7:35509/148‑1 (MQ=255)                                                                                                           cTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATc                                         >  5:253824/1‑149 (MQ=255)                                                                                                           cTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATc                                         >  2:258248/1‑149 (MQ=255)                                                                                                              ttGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcagc                                                                        >  5:265447/1‑115 (MQ=255)                                                                                                              ttGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAagcagc                                                                        <  6:265447/115‑1 (MQ=255)                                                                                                                  ggCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCt                                  >  3:141858/1‑149 (MQ=255)                                                                                                                    ccGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTg                                <  4:89048/149‑1 (MQ=255)                                                                                                                      gCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTAACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTc                              >  1:200332/1‑149 (MQ=255)                                                                                                                         tCGGGGCCCTTCGGGGCCACGCCCGCTATAACTTTTTTCTTCGGTCTCTGCGGGGGGGCGTTACTTGTGGTAGCGGGTGTGCCCGCGAGGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGt                            <  8:49860/148‑1 (MQ=255)                                                                                                                         tCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGt                            >  3:222130/1‑148 (MQ=255)                                                                                                                          cggggCCCTTCGGGGGCACGCCCGGTCTCACAGTTTTCATGGGTCTGCGCGGGGGGGCCGTACCTGTGGGCGCGGGGGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTa                          <  6:39320/146‑1 (MQ=37)                                                                                                                           gcgGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATAGGTGTGCGCGGCGGGGCCGTACCTGTGGGAGCGGGAGTGCCCGCGAAGGGCTGCAAAGCAGCACCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGtt                           >  1:44980/1‑147 (MQ=38)                                                                                                                                 cTTCGCGGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccg                   >  7:36634‑M1/1‑20 (MQ=255)                                                                                                                                    cgcgGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgc                  <  7:345651‑M1/147‑131 (MQ=255)                                                                                                                                    cgcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGc                  <  5:130112/147‑1 (MQ=255)                                                                                                                                     gcgGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccgcaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgccc                <  8:35509‑M1/148‑133 (MQ=255)                                                                                                                                     gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAGTCCCGCCCTTGTCGTTAAGCACTGCTAc               >  1:249387/1‑149 (MQ=255)                                                                                                                                     gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTa                >  2:100820/1‑148 (MQ=255)                                                                                                                                     gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTa                >  6:258521/1‑148 (MQ=255)                                                                                                                                     gcgGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTAc               <  1:100820/149‑1 (MQ=255)                                                                                                                                      cgGGCACGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccg               >  1:106238‑M1/1‑15 (MQ=255)                                                                                                                                       gggCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAg             >  7:285276/1‑149 (MQ=255)                                                                                                                                            cGCCCGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggg        <  3:291682‑M1/149‑141 (MQ=255)                                                                                                                                             gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa              >  3:159315/1‑142 (MQ=255)                                                                                                                                             gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa              <  4:164693/142‑1 (MQ=255)                                                                                                                                             gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa              <  4:159315/142‑1 (MQ=255)                                                                                                                                             gCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACa              >  3:164693/1‑142 (MQ=255)                                                                                                                                              cccGCTCTCACCGCATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGCATCGGGCGTGACCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCAACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTc      <  3:317944/149‑1 (MQ=39)                                                                                                                                               ccGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagg                                                     <  4:71951‑M1/101‑96 (MQ=255)                                                                                                                                               ccGCTCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagg                                                     >  3:71951‑M1/1‑6 (MQ=255)                                                                                                                                                cGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggctgcaaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcg     <  8:34081‑M2/148‑102 (MQ=255)                                                                                                                                                 gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGgagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcg     <  4:289767‑M2/147‑102 (MQ=255)                                                                                                                                                 gCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAACGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCAt   >  8:260750/1‑149 (MQ=255)                                                                                                                                                   tCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaag  >  8:252761‑M1/1‑2 (MQ=255)                                                                                                                                                   tCccacaggtacggccccgccgctcagaccgatgaatcctgtgagagcgggcgtgcccgcgaagggccgcgaagcggccccaataggtcagatcagggaatcggtgacgccttcgcgcgcttcccaagccgcccgcaccggggcgaag  >  3:159570‑M1/1‑2 (MQ=255)                                                                                                                                                    |                                                                                                                                                   GAGGCGTTGGCACGTCTTGGGCCTACGCCCATTCATCGGCGTTCCTTCGCCCCGGTGCGGGCGGCTTGGGAAGCGCGCGAAGGCGTCACCGATTCCCTGATCTGACCTATTGGGGCCGCTTCGCGGCCCTTCGCGGGCACGCCCGCTCTCACAGGATTCATCGGTCTGAGCGGCGGGGCCGTACCTGTGGGAGCGGGCGTGCCCGCGAAGGGCTGCAAAGCAGCCCCAAAAAAAGCCCCTAGTTAGGCTACAATCCCGCCCTTGTCGTTAAGCACTGCTACAGGATCTTCCATG  >  NC_002947/1799726‑1800019

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.