New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 4485733	60 (1.060)	6 (0.110)	5/248	NT	9.4%	coding (909/1302 nt)	PP_3977	hypothetical protein
	?	NC_002947	= 4485748	58 (1.070)					coding (924/1302 nt)	PP_3977	hypothetical protein

GTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAA  >  NC_002947/4485587‑4485879                                                                                                                                                   |                                                                                                                                                    gtgtATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGc                                                                                                                                                   >  1:8177/1‑149 (MQ=255)    tATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGctct                                                                                                                                                <  6:318345/149‑1 (MQ=255)         cccGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAAt                                                                                                                                           <  6:86384/149‑1 (MQ=255)            gAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATg                                                                                                                                          >  2:307765/1‑147 (MQ=255)            gAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATg                                                                                                                                          >  4:86940/1‑147 (MQ=255)              aaaaGCTCGGAATCATCGGTGGCCTGTCCGTAGATGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGgaga                                                                                                                                      <  2:345143/149‑1 (MQ=255)                   cTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGTCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctg                                                                                                                                 <  4:271420‑M1/149‑21 (MQ=255)                   cTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctg                                                                                                                                 <  8:175177‑M1/149‑21 (MQ=255)                   cTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAgtctg                                                                                                                                 <  7:39429‑M2/149‑6 (MQ=255)                   cTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAgtctg                                                                                                                                 >  1:133593‑M2/1‑144 (MQ=255)                      ggAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAgtctgg                                                                                                                                <  5:289967‑M2/147‑7 (MQ=255)                      ggAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGc                                                                                                                               <  1:229672/148‑1 (MQ=255)                         atcatcGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGa                                                                                                                           <  7:168265/149‑1 (MQ=255)                          tcatcGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGCCGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGa                                                                                                                           >  3:208404/1‑148 (MQ=255)                            atcGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGaaaa                                                                                                                        >  4:256332/1‑149 (MQ=255)                               ggTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAAccc                                                                                                                     <  1:307765/149‑1 (MQ=255)                                     cTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAg                                                                                                                >  8:14211/1‑148 (MQ=255)                                      tGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAg                                                                                                                >  5:118408/1‑147 (MQ=255)                                        tCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAgt                                                                                                            <  2:51531/149‑1 (MQ=255)                                          cGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAgtgg                                                                                                          >  4:282269/1‑149 (MQ=255)                                             agagGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGtggtgg                                                                                                       >  6:227451/1‑149 (MQ=255)                                              gagGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGtggtgg                                                                                                       <  8:39429/148‑1 (MQ=255)                                                ggTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAg                                                                                                    <  3:282269/149‑1 (MQ=255)                                                 gTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAgg                                                                                                   >  2:276706/1‑149 (MQ=255)                                                    ttCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑Ga                                                                                               >  4:118347/1‑149 (MQ=255)                                                             cTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGaaa                                                                                      <  5:227451/149‑1 (MQ=255)                                                              tCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GCCCCTCGAAAg                                                                                     >  8:12425/1‑149 (MQ=255)                                                                      ttAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTccc                                                                             >  8:341171/1‑149 (MQ=255)                                                                      ttAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCAAAAGACGATCTGACTCCAGACGCTCTCGAATg                                                                                                                                          >  2:322665/1‑89 (MQ=255)                                                                      ttAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCAAAAGACGATCTGACTCCAGACGCTCTCGAATg                                                                                                                                          <  1:322665/89‑1 (MQ=255)                                                                        aGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTccc                                                                             <  6:289967/147‑1 (MQ=255)                                                                         gacgacgacGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCt                                                                           <  4:208404/148‑1 (MQ=255)                                                                            gacgacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GAcc                                                                                             <  7:201003/127‑1 (MQ=255)                                                                            gacgacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GAcc                                                                                             >  8:201003/1‑127 (MQ=255)                                                                             acgacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctggagt                                                                                                                             <  6:163952‑M1/95‑25 (MQ=255)                                                                             acgacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctggagt                                                                                                                             >  5:163952‑M1/1‑71 (MQ=255)                                                                             acgacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAag                                                                      <  3:118347/149‑1 (MQ=255)                                                                               gacgGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAag                                                                      >  1:317078/1‑147 (MQ=255)                                                                                    aaTCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCaa                                                               >  5:226344/1‑149 (MQ=255)                                                                                     aTCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAAt                                                              <  7:14211/149‑1 (MQ=255)                                                                                      tCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctgg                                                                                                                                <  6:237010‑M1/83‑22 (MQ=255)                                                                                      tCACTGCTCTCGGAGTGATATTTGTCGAATCAACGCATTCGAAAGACGATCTGACTCCAGACtctccattcgagagcgtctgg                                                                                                                                >  5:237010‑M1/1‑62 (MQ=255)                                                                                        aCTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGa                                                            >  6:233332/1‑148 (MQ=255)                                                                                        aCTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGa                                                            >  3:4360/1‑148 (MQ=255)                                                                                          tGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATg                                                             >  6:310717/1‑145 (MQ=255)                                                                                          tGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATg                                                             <  5:310717/145‑1 (MQ=255)                                                                                            ctctCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAAt                                                       <  2:8177/149‑1 (MQ=255)                                                                                               tcGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCAc                                                    >  2:259564/1‑149 (MQ=255)                                                                                                 ggAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCAc                                                    <  1:259564/147‑1 (MQ=255)                                                                                                  gAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGa                                                 <  2:317078/149‑1 (MQ=255)                                                                                                   aGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAg                                                <  3:256332/149‑1 (MQ=255)                                                                                                        tatTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATTGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGaaa                                           <  6:369405/149‑1 (MQ=255)                                                                                                         atTTGTCGAATCCACGCATTCGAAAGACGCTCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCATGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGaaa                                           <  2:117306/148‑1 (MQ=255)                                                                                                          tttGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGTCGACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGaaa                                           <  1:276706/148‑1 (MQ=255)                                                                                                              tCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAagtgagt                                     <  3:86940/149‑1 (MQ=255)                                                                                                               cGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAagtgagt                                     <  5:63961/148‑1 (MQ=255)                                                                                                                gAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAagtgagt                                     >  4:354902/1‑147 (MQ=255)                                                                                                                      aCGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGc                             >  2:127290/1‑149 (MQ=255)                                                                                                                          aTTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGAc                         <  3:354902/149‑1 (MQ=255)                                                                                                                             cGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACt                        >  6:144153/1‑147 (MQ=255)                                                                                                                              gAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCa                      <  7:341171/148‑1 (MQ=255)                                                                                                                                      aTCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGt             >  3:25159/1‑149 (MQ=255)                                                                                                                                       tCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTg            >  1:104374/1‑149 (MQ=255)                                                                                                                                           aCTCCAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgt                                                               <  6:163952‑M2/95‑72 (MQ=255)                                                                                                                                           aCTCCAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgt                                                               >  5:163952‑M2/1‑24 (MQ=255)                                                                                                                                           aCTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGgcgc        <  6:226344/149‑1 (MQ=255)                                                                                                                                           aCTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGgcgc        <  2:104374/149‑1 (MQ=255)                                                                                                                                            cTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGgcgc        <  5:233332/148‑1 (MQ=255)                                                                                                                                             tCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGaaa                                           <  7:32119/112‑1 (MQ=255)                                                                                                                                             tCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGaaa                                           >  8:32119/1‑112 (MQ=255)                                                                                                                                             tCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGc                                 <  6:120857/122‑1 (MQ=255)                                                                                                                                             tCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGc                                 >  5:120857/1‑122 (MQ=255)                                                                                                                                             tCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTc      >  1:358780/1‑149 (MQ=255)                                                                                                                                              ccAGACtctccattcgagagcgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgtcgtctaagaatccgagccgccggaagacctctacggacaggccaccgatgattcc        <  5:289967‑M1/147‑142 (MQ=255)                                                                                                                                              ccAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgttgattcgacaaatatcactccgagagcagtga                                                                        >  5:237010‑M2/1‑21 (MQ=255)                                                                                                                                              ccAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtga                                                                        <  6:237010‑M2/83‑63 (MQ=255)                                                                                                                                               cAGACtctccattcgagagcgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgtcgtctaagaatccgagccgccggaagacctctacggacaggccaccgatgattccgag     >  1:133593‑M1/1‑5 (MQ=255)                                                                                                                                               cAGACtctccattcgagagcgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgtcgtctaagaatccgagccgccggaagacctctacggacaggccaccgatgattccgag     <  7:39429‑M1/149‑145 (MQ=255)                                                                                                                                               cAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgtcgtctaagaatccgagccgccggaagacctctacggacaggccaccgatgattccgag     <  8:175177‑M2/149‑130 (MQ=255)                                                                                                                                               cAGACGCTCTCGAATGGAGAgtctggagtcagatcgtctttcgaatgcgtggattcgacaaatatcactccgagagcagtgattccgtcgtcgtctaagaatccgagacgccggaagacctctacggacaggccaccgatgattccgag     <  4:271420‑M2/149‑130 (MQ=255)                                                                                                                                               cAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCg     >  8:109780/1‑148 (MQ=255)                                                                                                                                               cAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCg     >  8:54935/1‑148 (MQ=255)                                                                                                                                               cAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGt    <  4:25159/149‑1 (MQ=255)                                                                                                                                                 gACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTaa  <  6:51166/149‑1 (MQ=255)                                                                                                                                                 gACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTaa  <  4:4360/149‑1 (MQ=255)                                                                                                                                                   |                                                                                                                                                    GTGTATGACCCGAAAAAGCTCGGAATCATCGGTGGCCTGTCCGTAGAGGTCTTCCGGCGGCTCGGATTCTTAGACGACGACGGAATCACTGCTCTCGGAGTGATATTTGTCGAATCCACGCATTCGAAAGACGATCTGACTCCAGACGCTCTCGAATGGAGAGTCTGGCAGGAAAACCCGATAGCAGTGGTGGTAGGT‑GACCCTCGAAAGGTAGTCCCCTTCAAGGAGGCAATGAAAAATCACCGAGTGAAAGTGAGTGAGCTAGCCGACTCAGTGCTGGGTGGCGCTCGTAA  >  NC_002947/4485587‑4485879

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.