New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 = 583573967 (1.180)6 (0.110) 4/252 NT 7.9% coding (527/603 nt) PP_5114 adenine methyltransferase
?NC_002947 = 5835786 75 (1.370)coding (574/603 nt) PP_5114 adenine methyltransferase

GCCAAGCAGCAGTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCC  >  NC_002947/5835591‑5835887
                                                                                                                                                    |                                                                                                                                                     
gCCAAGCAGCAGTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCA                                                                                                                                                       <  8:35098‑M1/149‑1 (MQ=255)
  cAAGCAGCAGTACGATGTCGTGTTCCACGACCCGCCGATCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGCTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcc                                                                                                                                                     >  6:213661‑M1/1‑147 (MQ=255)
     gcagcaGTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAccggc                                                                                                                                                  >  6:158435‑M1/1‑144 (MQ=255)
         cagTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCggg                                                                                                                                              <  8:214428/149‑1 (MQ=255)
         cagTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCggg                                                                                                                                              <  4:273482/149‑1 (MQ=255)
            ttCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCaa                                                                                                                                           <  5:94601/149‑1 (MQ=255)
                 tGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGgc                                                                                                                                      >  1:170719/1‑149 (MQ=255)
                     gtgtTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCaa                                                                                                                                           <  1:120885/140‑1 (MQ=255)
                     gtgtTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCaa                                                                                                                                           >  2:120885/1‑140 (MQ=255)
                      tgtTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTg                                                                                                                                 >  4:274978/1‑149 (MQ=255)
                       gtTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTg                                                                                                                                 >  2:258461/1‑148 (MQ=255)
                          ccTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCAcc                                                                                                                             >  3:79940/1‑149 (MQ=255)
                          ccTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCAcc                                                                                                                             >  6:301893/1‑149 (MQ=255)
                           cTCGACCCGCCGGTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACcg                                                                                                                            >  1:222437/1‑149 (MQ=255)
                           cTCGACACGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACcg                                                                                                                            >  3:13152/1‑149 (MQ=255)
                              gACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCga                                                                                                                         <  4:79940/149‑1 (MQ=255)
                                         ccATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCg                                                                                                             >  2:170651/1‑149 (MQ=255)
                                           aTCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGc                                                                                                           >  3:216652/1‑149 (MQ=255)
                                            tCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctggccggtcttcttctcgcggtgcaggcgccagttgcccgg                                                                                                            >  1:250102‑M1/1‑105 (MQ=255)
                                              aGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAg                                                                                                        <  1:258461/149‑1 (MQ=255)
                                                gACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGagaa                                                                                                                      <  1:169783/134‑1 (MQ=255)
                                                gACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGagaa                                                                                                                      >  2:169783/1‑134 (MQ=255)
                                                    tgctgGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGc                                                                                                           <  6:204603/140‑1 (MQ=255)
                                                    tgctgGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAgagcgg                                                                                                   >  5:204603/1‑143 (MQ=255)
                                                      ctgGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctggccggtcttcttctcgcggtgcaggcgccagttgcccggcagctgcaa                                                                                                   <  3:315056‑M1/147‑53 (MQ=255)
                                                      ctgGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctggccggtcttcttctcgcggtgcaggcgccagttgcccggcagctgcaa                                                                                                   <  2:250102‑M1/147‑53 (MQ=255)
                                                      ctgGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctggccgggcttcttctcgcggtgcaggcgccagttgcccggcagctgcaa                                                                                                   <  5:213661‑M1/147‑53 (MQ=255)
                                                         gCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTg                                                                                                                                 >  6:136545/1‑114 (MQ=255)
                                                         gCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTg                                                                                                                                 <  5:136545/114‑1 (MQ=255)
                                                                 cTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGTGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTgg                                                                                      <  2:17350/148‑1 (MQ=255)
                                                                 cTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTgg                                                                                      >  1:17350/1‑148 (MQ=255)
                                                                 cTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTgg                                                                                      >  2:180658/1‑148 (MQ=255)
                                                                 cTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCAAGGTGCACTACGCACTCTgg                                                                                      >  3:83154/1‑148 (MQ=255)
                                                                        aTGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCCCTCTGGCAGCgggg                                                                              >  4:43402/1‑149 (MQ=255)
                                                                              gAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGa                                                                          <  2:170719/147‑1 (MQ=255)
                                                                                 cAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTAcc                                                                     <  4:216652/149‑1 (MQ=255)
                                                                                 cAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTAcc                                                                     >  1:343817/1‑149 (MQ=255)
                                                                                  aGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTAccc                                                                    <  3:274978/149‑1 (MQ=255)
                                                                                    aaTCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAATGTCGGACCAGATGAACAACGCACTCTGGCACAGGGGCTCAtaaaccc                                                                   >  1:119694/1‑143 (MQ=255)
                                                                                    aaTCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCcgc                                                                  >  2:160088/1‑149 (MQ=255)
                                                                                      tCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCgg                                                                <  2:343817/149‑1 (MQ=255)
                                                                                         gTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCtt                                                             <  5:301893/149‑1 (MQ=255)
                                                                                         gTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCtt                                                             <  1:180658/149‑1 (MQ=255)
                                                                                            gCTGGGCGTGCATGGATGGGGCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTgg                                                           <  5:285748/148‑1 (MQ=255)
                                                                                            gCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTgg                                                           <  3:355715/148‑1 (MQ=255)
                                                                                            gCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTgg                                                           >  4:355715/1‑148 (MQ=255)
                                                                                                  cGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctggccggtcttcttctcgcggtgcaggcgccagttgcccggcagctgcaag                                                                                                  <  3:286063‑M1/104‑54 (MQ=255)
                                                                                                  cGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAcctcgacggtcttcttctctcggtgcaggcgacagttgcacggcagctgcaag                                                                                                  >  4:286063‑M1/1‑51 (MQ=255)
                                                                                                         gCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAAc                                                                                                                                          <  3:220332/57‑1 (MQ=255)
                                                                                                         gCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAAc                                                                                                                                          >  4:220332/1‑57 (MQ=255)
                                                                                                         gCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCcgcg                                                                 <  3:324915/129‑1 (MQ=255)
                                                                                                         gCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCcgcg                                                                 >  4:324915/1‑129 (MQ=255)
                                                                                                         gCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTAc                                             >  4:53588/1‑149 (MQ=255)
                                                                                                           aTGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGTAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCg                                           >  4:54562/1‑149 (MQ=255)
                                                                                                               gTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCAcc                                       >  2:2794/1‑149 (MQ=255)
                                                                                                                  tACACCGAAAGCGAAGCGGCACCCTCGACCTTACAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCa                                    >  1:227145/1‑149 (MQ=255)
                                                                                                                   acacCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCAc                                   >  1:37038/1‑149 (MQ=255)
                                                                                                                    cacCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGc                                                                             <  2:138853/106‑1 (MQ=255)
                                                                                                                    cacCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGc                                                                             >  1:138853/1‑106 (MQ=255)
                                                                                                                    cacCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTggg                                                          >  8:210355/1‑125 (MQ=255)
                                                                                                                    cacCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTggg                                                          <  7:210355/125‑1 (MQ=255)
                                                                                                                       cGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTgg                                                           <  5:72905/121‑1 (MQ=255)
                                                                                                                       cGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTgg                                                           >  6:72905/1‑121 (MQ=255)
                                                                                                                       cGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTgc                               >  8:161843/1‑149 (MQ=255)
                                                                                                                       cGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTgc                               >  4:17326/1‑149 (MQ=255)
                                                                                                                       cGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTgc                               >  4:233449/1‑149 (MQ=255)
                                                                                                                              gaagcgGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATgg                        <  1:170651/149‑1 (MQ=255)
                                                                                                                                 gcgGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTg                     <  3:43402/149‑1 (MQ=255)
                                                                                                                                     cACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCTGCCAGGTGAACTACGCACTCTGGAAGCGGGGCTGATTACCCTCGGCTTGGTTGTACTTAGTTACCGCAACCCACCTGCTCCATGGTTGAAgg                 <  4:83154/149‑2 (MQ=255)
                                                                                                                                        ccTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTg               >  1:317/1‑148 (MQ=255)
                                                                                                                                          tCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAc            >  6:291558/1‑149 (MQ=255)
                                                                                                                                            gACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTTATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAc            <  2:222437/147‑1 (MQ=255)
                                                                                                                                            gACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGtt                      <  5:290580/137‑1 (MQ=255)
                                                                                                                                            gACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGtt                      >  6:290580/1‑137 (MQ=255)
                                                                                                                                            gACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCAcc           <  1:160088/148‑1 (MQ=255)
                                                                                                                                            gACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCt          >  1:207041/1‑149 (MQ=255)
                                                                                                                                               cTTGCAGCTGCCGTGCAACTGTCGCCTGCACCGAGAGAAGAAGACCGTCGAGGtgcaaggtcgagggtgccgcttcgctttcggtgtagacccatgcctgctcg                                                    >  4:286063‑M2/1‑53 (MQ=255)
                                                                                                                                               cTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGtgcaaggtcgagggtgccgcttcgctttcggtgtagacccatgcctgctcg                                                    <  3:286063‑M2/104‑52 (MQ=255)
                                                                                                                                                ttGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGCCCGGCCAGGtgcaaggtcgagggtgccgcttcgctttcggtgtagacccatgcctgctcgcccagccactgattctgctccagcatgttgcaggtgttggccag        <  5:213661‑M2/147‑96 (MQ=255)
                                                                                                                                                ttGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGtgcaaggtcgagggtgccgcttcgctttcggtgtagacccatgcctgctcgcccagccactgattctgctccagcatgttgcaggtgttggccag        <  3:315056‑M2/147‑96 (MQ=255)
                                                                                                                                                ttGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGtgcaaggtcgagggtgccgcttcgctttcggtgtagacccatgcctgctcgcccagccactgattctgctccagcatgttgcaggtgttggccag        <  2:250102‑M2/147‑96 (MQ=255)
                                                                                                                                                  gCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAttt    >  7:76820/1‑149 (MQ=255)
                                                                                                                                                   cAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAttt    >  5:57404/1‑148 (MQ=255)
                                                                                                                                                   cAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAttt    <  2:317/148‑1 (MQ=255)
                                                                                                                                                   cAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCAttt    <  8:76820/148‑1 (MQ=255)
                                                                                                                                                    aGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTcc  >  7:170389/1‑149 (MQ=255)
                                                                                                                                                    aGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTcc  >  6:187894/1‑149 (MQ=255)
                                                                                                                                                    aGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTcc  >  2:166273/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
GCCAAGCAGCAGTTCGATGTCGTGTTCCTCGACCCGCCGTTCCATCAGGACCTGCTGGCCAACACCTGCAACATGCTGGAGCAGAATCAGTGGCTGGGCGAGCAGGCATGGGTCTACACCGAAAGCGAAGCGGCACCCTCGACCTTGCAGCTGCCGGGCAACTGGCGCCTGCACCGCGAGAAGAAGACCGGCCAGGTGCACTACGCACTCTGGCAGCGGGGCTGATTACCCGCGGCTTGGGTGTACTTAGTTACCGCACCCCACCTGCGCCATGGTTGAAGCTGCACCTTCATTTCC  >  NC_002947/5835591‑5835887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.