New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	6031192 =	48 (0.850)	4 (0.070)	4/248	NT	8.0%	coding (46/1590 nt)	dppA‑IV	dipeptide transport protein
	?	NC_002947	6031240 =	46 (0.850)					coding (94/1590 nt)	dppA‑IV	dipeptide transport protein

GTGTGGTCATTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATGCGGCGCAAG  >  NC_002947/6031061‑6031339                                                                                                                                     |                                                                                                                                                    gtgtGGTCATTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGcc                                                                                                                                    >  1:3893/1‑149 (MQ=255)       tCATTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTCTTCACAACCCTGTT‑CGCAGCTGGCGCTGCCCAGGccgctccg                                                                                                                              >  8:212606/1‑149 (MQ=255)         aTTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGTCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGccgctccgc                                                                                                                             <  7:18674/148‑1 (MQ=255)         aTTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGccgctccgc                                                                                                                             <  5:94039/148‑1 (MQ=255)            tGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGa                                                                                                                          <  5:37094/148‑1 (MQ=255)              ccGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGc                                                                                                                        <  6:147672/148‑1 (MQ=255)               cggcggGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCTACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGt                                                                                                                      <  7:29402/149‑1 (MQ=255)                ggcgggcgCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGtt                                                                                                                     <  7:212606/149‑1 (MQ=255)                  tcggcaccaccttgccttgcgccgcatcgaactccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGttt                                                                                                                    <  8:176341‑M1/34‑1 (MQ=255)                       gcACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCg                                                                                                              <  7:294769/149‑1 (MQ=255)                                tAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAg                                                                                                            <  1:6672/142‑1 (MQ=255)                                tAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAg                                                                                                            >  2:6672/1‑142 (MQ=255)                                 cttgcgccgcatcgaactccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAg                                                                                                       >  5:176559‑M1/101‑147 (MQ=255)                                 cttgcgccgcatcgaactccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAg                                                                                                       <  6:176559‑M1/47‑1 (MQ=255)                                    gcgccgcatcgaactccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGccc                                                                                                    >  7:176341‑M1/98‑147 (MQ=255)                                     cTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCATATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGaa                                                                                                <  1:114882/149‑1 (MQ=255)                                      ttttCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAg                                                                                               >  5:112423/1‑149 (MQ=255)                                        ttCCAGACTGCACTGGAAGATGGGCCACTGACAGCCTAGGAGCCACCATGCGTGTCGCAGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAgg                                                                                              <  4:59675/148‑1 (MQ=255)                                           cAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGc                                                                                                                  <  6:336758/125‑1 (MQ=255)                                           cAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGc                                                                                                                  >  5:336758/1‑125 (MQ=255)                                             gACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGa                                                                                        >  8:162883/1‑149 (MQ=255)                                              aCTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCg                                                                                                  >  2:46216/1‑138 (MQ=255)                                              aCTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCg                                                                                                  <  1:46216/138‑1 (MQ=255)                                               cTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACg                                                                                      <  1:180693/149‑1 (MQ=255)                                                tGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCtt                                                                                           >  2:232561/1‑143 (MQ=255)                                                tGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCtt                                                                                           <  1:232561/143‑1 (MQ=255)                                                  tccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGgc                                                                                                                                                >  6:219407‑M1/84‑89 (MQ=255)                                                  tccaccaggcggttcatcagcacgtcggcggtggcgttggtggtggtgagcgaattgtactggaccacgtcgaagccttcgggGCTGgc                                                                                                                                                <  5:219407‑M1/6‑1 (MQ=255)                                                  cACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGa                                                                                                                          >  1:12131/1‑110 (MQ=255)                                                  cACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGa                                                                                                                          <  2:12131/110‑1 (MQ=255)                                                         aGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTa                                                                            <  6:112423/149‑1 (MQ=255)                                                         aGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTa                                                                            >  3:235418/1‑149 (MQ=255)                                                                ccACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGAACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCg                                                                     <  5:274973/149‑1 (MQ=255)                                                                ccACTGACAGCCAAGGAGCCACCATGCCTGTCGCCGCACTTTACTTATAGATCACCACCCTGTA‑CGCCGCTGGCGCTCCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAATGCTTCGACGTGGTCCAGAACAAATCg                                                                     >  2:311214/1‑149 (MQ=255)                                                                 cACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGc                                                                    >  3:48358/1‑149 (MQ=255)                                                                    tGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACAACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTca                                                                 >  5:251170/1‑149 (MQ=255)                                                                          ggaatgAGCTAGCATGAGTGGGGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTcaccacca                                                           <  6:251170/144‑1 (MQ=255)                                                                          ccAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTc                                                                                 <  6:333839/127‑1 (MQ=255)                                                                           cAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTTGCGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTcaccacca                                                           >  1:93800/1‑149 (MQ=255)                                                                            aaGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGTGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTcaccaccac                                                          >  2:269853/1‑148 (MQ=255)                                                                               gAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAAc                                                      <  7:312078/149‑1 (MQ=255)                                                                                    accaTGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCAc                                                 >  4:184405/1‑149 (MQ=255)                                                                                      caTGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTAGCTCACCACCACCAACGCCAccg                                               >  5:218255/1‑149 (MQ=255)                                                                                           gtgtCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGAc                                          >  8:176453/1‑149 (MQ=255)                                                                                                   gcACTTTCCTTTTTGTTCACCACCCTGTT‑CGACGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCtgat                                  <  1:311214/149‑1 (MQ=255)                                                                                                   gcACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCtgat                                  >  7:323137/1‑149 (MQ=255)                                                                                                   gcACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCtgat                                  <  7:162883/149‑1 (MQ=255)                                                                                                         tCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAAc                              <  3:139433/147‑1 (MQ=255)                                                                                                                  ttCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGa                   <  2:93800/149‑1 (MQ=255)                                                                                                                     accaccCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGtt                >  6:307055/1‑149 (MQ=255)                                                                                                                      ccaccCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTc               <  3:184405/149‑1 (MQ=255)                                                                                                                       caccCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTc               >  5:311743/1‑148 (MQ=255)                                                                                                                       caccCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCg              <  8:323137/149‑1 (MQ=255)                                                                                                                              tt‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGTAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATgcggc       >  8:250375/1‑149 (MQ=255)                                                                                                                                   ccgcTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATGCGgcgc     >  1:84032/1‑147 (MQ=255)                                                                                                                                    cgcTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATGCGGCgcaag  >  1:348810/1‑149 (MQ=255)                                                                                                                                    cgcTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATGCGGCgcaag  >  3:202936/1‑149 (MQ=255)                                                                                                                                     |                                                                                                                                                    GTGTGGTCATTTGCCGGCGGGCGCACTAGGGTAAGCCTTTTCCAGACTGCACTGGCAGATGGGCCACTGACAGCCAAGGAGCCACCATGCGTGTCGCCGCACTTTCCTTATTGTTCACCACCCTGTT‑CGCCGCTGGCGCTGCCCAGGCCGCTCCGCTGAGCGTTTGCAGCGAGGCCAGCCCCGAAGGCTTCGACGTGGTCCAGTACAATTCGCTCACCACCACCAACGCCACCGCCGACGTGCTGATGAACCGCCTGGTGGAGTTCGATGCGGCGCAAG  >  NC_002947/6031061‑6031339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.