New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 27906 | 47 (0.830) | 4 (0.070) | 4/250 | NT | 7.5% | coding (1642/1698 nt) | PP_0024 | membrane‑associated metal‑dependent hydrolase |
? | NC_002947 | = 27927 | 53 (0.970) | coding (1621/1698 nt) | PP_0024 | membrane‑associated metal‑dependent hydrolase |
CAGCTTCTCTCAGCTGTCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCTTTGTTTGC > NC_002947/27779‑28075 | cAGCTTCTCTCAGCTGTCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGt > 3:318804/1‑149 (MQ=255) cAGCTGTCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGt > 6:268919/1‑139 (MQ=255) cAGCTGTCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGt < 5:268919/139‑1 (MQ=255) tCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTcatcat < 2:74777/148‑1 (MQ=255) tCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAATGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATg > 3:4968/1‑149 (MQ=255) aaaGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGc < 4:318804/148‑1 (MQ=255) gCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACg < 1:327034/149‑1 (MQ=255) gCAGACCCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGtgtg > 6:93955/1‑148 (MQ=255) cAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTgg > 1:273233/1‑148 (MQ=255) aaCCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCATAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACa < 7:329117/149‑1 (MQ=255) ccGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAgg < 2:154885/149‑1 (MQ=255) ccTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGa < 8:321381/141‑1 (MQ=255) ccTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGa > 7:321381/1‑141 (MQ=255) cGATGATCCTGTCCACATCTAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTgg < 3:149576/149‑1 (MQ=255) cGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTgg > 4:142095/1‑149 (MQ=255) cGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTgg > 8:166356/1‑149 (MQ=255) cGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTg > 4:272723/1‑148 (MQ=255) cGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTg < 3:272723/148‑1 (MQ=255) gatgatCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGtgtg > 8:324010/1‑132 (MQ=255) gatgatCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGtgtg < 7:324010/132‑1 (MQ=255) tCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAATGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGa < 4:4968/149‑1 (MQ=255) acaTCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAGCAGGTTGTCGTGGCTCAGCGGTGACGt > 4:94587/1‑149 (MQ=255) tCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGt > 4:325772/1‑149 (MQ=255) gAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGttt < 1:249792/149‑1 (MQ=255) aTTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGc > 8:199381/1‑149 (MQ=255) agagGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCttt > 2:161037/1‑148 (MQ=255) agagGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTc < 7:199381/149‑1 (MQ=255) agagGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTc < 3:142095/149‑1 (MQ=255) ggCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGCCAGTGAAATCCAGCGCTGACCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGAGTGGAACAGGTTGTCGTGGCTCAGCCGTCACGTGGTTTGAGCTTTCaaa > 5:149408/1‑149 (MQ=255) aGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAaacaac > 5:136680/1‑149 (MQ=255) gAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAaacaac < 5:175482/148‑1 (MQ=255) gAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAaacaac > 6:175482/1‑148 (MQ=255) gAATAAGAGCCTCCGACAAAGGGCTAACAAGGGGCAGTGAAAACCAGCGCTGAGAGATACTAAGACGTCAGGACGTTCATAATGCAGAGCACGGTGTGGAACAGGTTGTAGTGGCTAAGCGGTGACGTGCTTTGATCTTTCAAACAAcc > 8:259009/1‑149 (MQ=255) aaGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCAACg > 6:326934/1‑149 (MQ=255) cTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGAcc > 1:165930/1‑149 (MQ=255) cTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGAcc > 3:334443/1‑149 (MQ=255) aCAAAGGGCTTACTAGGGGCAGTGAAATCCAGAGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGATCATGGTTTTGAACAGGTTGTCGTGGCTCTGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTc < 7:155946/149‑1 (MQ=255) gCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACTGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTc < 7:259009/149‑1 (MQ=255) cAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGGGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCgcgag < 5:93955/149‑1 (MQ=255) cAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAg < 5:76069/102‑1 (MQ=255) cAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCAGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAg > 6:76069/1‑102 (MQ=255) aGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAg < 3:79025/149‑1 (MQ=255) gTGAAATCCAGCGCTGAGCGATACGAAGACGTctggatttcactgccccttgtaagcccttgtcggaggctcttattctggcctctgaatgttcgatgtggaccggatcatcggccaggcgg < 6:240514‑M2/122‑91 (MQ=255) gTGAAATCCAGCGCTGAGCGATACGAAGACGTctggatttcactgccccttgtaagcccttgtcggaggctcttattctggcctctgaatgttcgatgtggaccggatcatcggccaggcgg > 5:240514‑M2/1‑32 (MQ=255) gAAATCCAGCGCTGAGCGATACGAAGACGTctggatttcactgccccttgtaagccctttgtcggaggctcttattctggcctctgaatgttcgatgtggaccggatcatcggccaggcggttctgcaccagcctgctttgacagctga < 8:293983‑M2/149‑120 (MQ=255) aTCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATcc < 6:136680/149‑1 (MQ=255) tCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATcc > 3:236074/1‑148 (MQ=255) cAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCa > 4:100624/1‑147 (MQ=255) gcTGAGCGATACGAAGACGTctggatttcactgccccttgtaagccctttgtcggaggctcttattctggcctctgaatgttcgatgtggaccggatcatcggccaggcggttctgcaccagcctgctttgacagctgagagaagctgg > 7:293983‑M2/1‑20 (MQ=255) gcTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGTTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACTTGGTTTTAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTAc < 5:326934/149‑1 (MQ=255) gcTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTAc < 3:325772/149‑1 (MQ=255) tGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTAcc > 7:17548/1‑148 (MQ=255) aGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAAc < 1:161037/149‑1 (MQ=255) gATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGc < 1:176071/149‑1 (MQ=255) aCGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCAcc > 1:4855/1‑149 (MQ=255) gAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACATGTTGTCGTGGCTCATCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCAAAAGTACAAACGGCACCtt > 7:146021/1‑149 (MQ=255) gAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGt < 3:103340/135‑1 (MQ=255) gAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGt > 4:103340/1‑135 (MQ=255) aaGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCttt < 4:334443/149‑1 (MQ=255) aaGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCttt > 8:294112/1‑149 (MQ=255) aCGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCtttgtt > 3:36926/1‑149 (MQ=255) tCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTTGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCTTTGTTTGc < 7:166356/149‑1 (MQ=255) | CAGCTTCTCTCAGCTGTCAAAGCAGGCTGGTGCAGAACCGCCTGGCCGATGATCCGGTCCACATCGAACATTCAGAGGCCAGAATAAGAGCCTCCGACAAAGGGCTTACAAGGGGCAGTGAAATCCAGCGCTGAGCGATACGAAGACGTCTGGACGTTCATCATGCCGAGCACGGTGTGGAACAGGTTGTCGTGGCTCAGCGGTGACGTGGTTTGAGCTTTCAAACAACCCACGTTGACCTTTTCGCTCTTCGCGAGCGAGTCAGACATCCAAAGTACCAACGGCACCTTTGTTTGC > NC_002947/27779‑28075 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |