New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 276298 =51 (0.900)6 (0.110) 5/252 NT 11.5% coding (870/1221 nt) PP_0223 DszC family monooxygenase
?NC_002947 276349 = 43 (0.780)coding (819/1221 nt) PP_0223 DszC family monooxygenase

TCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGCACCACGTCGGCTGCGCTGA  >  NC_002947/276194‑276497
                                                                                                                                                           |                                                                                                                                                    
ctaccccggtcggcccgctggcgcagatcctccatgccgccatcgacaccggtattgcccgcgccgcctatgaagatgccctgcacttcgtgcgcacccgcagcCGTC‑‑‑‑‑‑‑‑‑‑‑CGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGc                                                                                                                                                  >  6:260127‑M1/105‑149 (MQ=255)
        gtcggcccgctggcgcagatcctccatgccgccatcgacaccggtattgcccgcgccgcctatgaagatgccctgcacttcgtgcgcacccgcagcCGTCCGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGc                                                                                                                                                     >  1:101120‑M1/97‑149 (MQ=255)
        gCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGc                                                                                                                                                     >  3:352344/1‑149 (MQ=255)
            tcgtcgCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGc                                                                                                                                                  <  3:274970/148‑1 (MQ=255)
             cgtcgCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCTGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                <  8:312023/149‑1 (MQ=255)
             cgtcgCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                <  5:36052/149‑1 (MQ=255)
                   gggCGCGGGAGAGGTATTCGCCTGCGCGCTCCAGCAGTGCTGCGGCCGCGTGCAAGCGGACCGCCAGAGGGCCGAATCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTgcgc                                                                                                                                          <  6:372826/149‑1 (MQ=255)
                             gAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                >  1:102343/1‑133 (MQ=255)
                             gAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                <  2:102343/133‑1 (MQ=255)
                              aGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAg                                                                                                                               <  7:203017/149‑1 (MQ=255)
                               ggTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGt                                                                                                                                              <  1:31752/133‑1 (MQ=255)
                               ggTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGt                                                                                                                                              >  2:31752/1‑133 (MQ=255)
                                gTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAggg                                                                                                                             >  7:24706/1‑149 (MQ=255)
                                   ttCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                >  8:244994/1‑127 (MQ=255)
                                   ttCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCgg                                                                                                                                                <  7:244994/127‑1 (MQ=255)
                                    tCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGaa                                                                                                                                     >  5:87438/1‑137 (MQ=255)
                                    tCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGaa                                                                                                                                     <  6:87438/137‑1 (MQ=255)
                                      gCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCt                                                                                                                        >  7:246633/1‑148 (MQ=255)
                                             cgcTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAggc                                                                                                                <  8:184159/149‑1 (MQ=255)
                                             cgcTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAggc                                                                                                                <  8:179104/149‑1 (MQ=255)
                                                   agcagGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGCCCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGcgcg                                                                                                          >  6:145634/1‑149 (MQ=255)
                                                            tCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAg                                                                                                                               <  1:126410/119‑1 (MQ=255)
                                                            tCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAg                                                                                                                               >  2:126410/1‑119 (MQ=255)
                                                                    gTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGt                                                                                                                                              >  6:95041/1‑96 (MQ=255)
                                                                    gTGCAAGCGGACCGCCAGATGGACGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGt                                                                                                                                              <  5:95041/96‑1 (MQ=255)
                                                                        aaGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATg                                                                                       >  1:165549/1‑147 (MQ=255)
                                                                        aaGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATg                                                                                       <  2:165549/147‑1 (MQ=255)
                                                                         aGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATggcg                                                                                    <  8:246633/149‑1 (MQ=255)
                                                                                cGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATgga                                                                             <  5:140296/149‑1 (MQ=255)
                                                                                cGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATg                                                                               >  8:231412/1‑147 (MQ=255)
                                                                                          ccGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTgcgc                                                                   <  8:24706/149‑1 (MQ=255)
                                                                                           cGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATa                                                                                                                   <  7:293036/100‑1 (MQ=255)
                                                                                           cGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATa                                                                                                                   >  8:293036/1‑100 (MQ=255)
                                                                                           cGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTgcgc                                                                   >  8:216651/1‑148 (MQ=255)
                                                                                            gAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTgcgc                                                                   >  6:120488/1‑147 (MQ=255)
                                                                                                      gccgtccgtgggtcgactccggcctggacaaggccacggatgacccacggacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGAc                                                       >  1:101120‑M2/54‑149 (MQ=255)
                                                                                                        cgtccgtgggtcgactccggcctggacaaggccacggatgacccactgacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGc                                                           >  4:213881‑M2/52‑143 (MQ=255)
                                                                                                        cgtccgtgggtcgactccggcctggacaaggccacggatgacccactgacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGc                                                           <  3:213881‑M2/92‑1 (MQ=255)
                                                                                                         gtccgtgggtcgactccggcctggacaaggccacggatgacccactgacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCgg                                                    >  2:362940‑M2/51‑149 (MQ=255)
                                                                                                            aGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGt                                                 <  4:352344/149‑1 (MQ=255)
                                                                                                              gcagccgtccgtgggtcgactccggcctggacaaggccacggacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAg                                               >  6:260127‑M2/46‑149 (MQ=255)
                                                                                                                     tCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGgt                                                                                              >  2:154576/1‑95 (MQ=255)
                                                                                                                     tCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGgt                                                                                              <  1:154576/95‑1 (MQ=255)
                                                                                                                        gTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCg                                       >  3:32312/1‑147 (MQ=255)
                                                                                                                         tGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAg                                    <  5:120488/149‑1 (MQ=255)
                                                                                                                          ggCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGGAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAgg                                   >  7:207794/1‑149 (MQ=255)
                                                                                                                             cTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGgcgc                                >  2:90314/1‑149 (MQ=255)
                                                                                                                                  ccAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTg                            >  4:219760/1‑148 (MQ=255)
                                                                                                                                    aGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCggg                                                   <  8:143262/123‑1 (MQ=255)
                                                                                                                                    aGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCggg                                                   >  7:143262/1‑123 (MQ=255)
                                                                                                                                           ggatgacccacggacgGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGcacc                  <  2:101120‑M2/133‑1 (MQ=255)
                                                                                                                                             tCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGcaccac                >  5:298668/1‑149 (MQ=255)
                                                                                                                                                 cccACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGCACCACGTCg            >  6:68797/1‑149 (MQ=255)
                                                                                                                                                  ccACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTg                            <  3:25895/132‑1 (MQ=255)
                                                                                                                                                  ccACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTg                            >  4:25895/1‑132 (MQ=255)
                                                                                                                                                          gGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGCACCACGTCGGCTGCGCt    <  1:90314‑M2/147‑1 (MQ=255)
                                                                                                                                                           gCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGCACCACGTCGGCTGCGCTGa  <  8:207794/149‑1 (MQ=255)
                                                                                                                                                           |                                                                                                                                                    
TCGGCAGTGCTGTCGTCGCGGGCGCGGTCGAGGTATTCGCCTGCGCGCTCCAGCAGGGCTTCGGCCGCGTGCAAGCGGACCGCCAGATGGCCGAAGCTTTTCAGCGTCAGTGGGTCATCCGTGGCCTTGTCCAGGCCGGAGTCGACCCACGGACGGCTGCGGGTGCGCACGAAGTGCAGGGCATCTTCATAGGCGGCGCGGGCAATACCGGTGTCGATGGCGGCATGGAGGATCTGCGCCAGCGGGCCGACCGGGGTAGGGCGCTCGAAGGCGCTTTGGAACGGCACCACGTCGGCTGCGCTGA  >  NC_002947/276194‑276497

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.