New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_002947 640393 =45 (0.790)3 (0.060) 3/240 NT 6.9% coding (352/1929 nt) PP_0551 MORN domain‑containing protein
?NC_002947 640437 = 39 (0.750)coding (308/1929 nt) PP_0551 MORN domain‑containing protein

CTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGCCGAGT  >  NC_002947/640289‑640579
                                                                                                                                                    |                                                                                                                                              
cTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCt                                                                                                                                                <  2:242461/149‑1 (MQ=255)
            gCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTaa                                                                                                                                     <  5:351761/148‑1 (MQ=255)
            gCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAAc                                                                                                                                    >  3:285452/1‑149 (MQ=255)
            gCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAAc                                                                                                                                    >  4:17405/1‑149 (MQ=255)
                      aCCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTc                                                                                                                          <  4:285452/149‑1 (MQ=255)
                        cTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAg                                                                                                                        >  5:37669/1‑149 (MQ=255)
                                 cTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGt                                                                                                                <  7:340250/148‑1 (MQ=255)
                                   ggCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCg                                                                                                             >  2:127196/1‑149 (MQ=255)
                                    gccatgccatTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGt                                                                                                            >  8:43935/1‑149 (MQ=255)
                                      catgccatTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTcg                                                                                                          >  5:241373/1‑149 (MQ=255)
                                             ttCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGa                                                                                                   <  1:127196/149‑1 (MQ=255)
                                               cGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGag                                                                                                  <  6:241373/148‑1 (MQ=255)
                                                   cTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCCACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGagcagc                                                                                              >  6:151460/1‑148 (MQ=255)
                                                      gCCGTGCCACTGGCCGTCCTTGAAGCTGCAGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCAGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGAtt                                                                                          >  7:74993/1‑149 (MQ=255)
                                                       ccGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATtc                                                                                         <  1:147304/149‑1 (MQ=255)
                                                       ccGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATtc                                                                                         >  6:79645/1‑149 (MQ=255)
                                                               cTGGGCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATtcgccatcgc                                                                                 <  2:55439/149‑1 (MQ=255)
                                                               cTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATtcgccatcgc                                                                                 <  7:43935/149‑1 (MQ=255)
                                                                  gCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATtcgccatcgcca                                                                               <  6:281997/148‑1 (MQ=255)
                                                                            aaGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGag                                                                    <  5:151460/149‑1 (MQ=255)
                                                                                tGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGagcag                                                                 >  4:49376/1‑148 (MQ=255)
                                                                                  ctggCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGcagcag                                                              <  7:317908/147‑1 (MQ=255)
                                                                                  ccGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGcagcag                                                              <  5:79645/149‑1 (MQ=255)
                                                                                  ccGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCAGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGagcagc                                                                <  8:74993/147‑1 (MQ=255)
                                                                                   cGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGcagcag                                                              >  8:194216/1‑148 (MQ=255)
                                                                                     gCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGcagcag                                                              >  8:317908/1‑146 (MQ=255)
                                                                                       gTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGAc                                                           >  5:2430/1‑147 (MQ=255)
                                                                                          ccAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAgg                                                       <  6:37669/148‑1 (MQ=255)
                                                                                              cTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAAt                                                  >  7:224916/1‑149 (MQ=255)
                                                                                               tGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATg                                                 >  7:309914/1‑149 (MQ=255)
                                                                                                 ccGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATg                                                 <  8:224916/147‑1 (MQ=255)
                                                                                                   gTTGGGGTAGTCTATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGa                                             <  8:256988/149‑1 (MQ=255)
                                                                                                   gTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGa                                             <  3:204672/149‑1 (MQ=255)
                                                                                                      ggggTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAg                                            >  4:349320/1‑147 (MQ=255)
                                                                                                       gggTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCCGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAg                                         >  5:237024/1‑149 (MQ=255)
                                                                                                         gtagtcgatggcctgctgcagggtgagggccggatcgactaccTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAggcggc                                                                       >  8:302375‑M2/44‑117 (MQ=255)
                                                                                                         gtagtcgatggcctgctgcagggtgagggccggatcgactaccTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAggcggc                                                                       <  7:302375‑M2/74‑1 (MQ=255)
                                                                                                          tagtcgatggcctgctgcagggtgagggccggatcgactaccTGCCCCCGGTACCGCCCACCGTCAGGCAGACGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCCCAGGCGGCGACCAGCAGGACCAGGGTAATGGGGAGCAGTg                                       >  6:108141‑M2/43‑148 (MQ=255)
                                                                                                            GTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGa                                     >  8:309914‑M1/1‑148 (MQ=255)
                                                                                                            GTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGAc                                    <  3:192220‑M1/149‑1 (MQ=255)
                                                                                                               GATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGACCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCa                                 <  1:44619‑M1/149‑1 (MQ=255)
                                                                                                                 TCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCACCCGGTAACGCCCACCGTCACGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCAACGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATg                               <  6:103689‑M1/149‑1 (MQ=255)
                                                                                                                   cGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGc                             <  6:237024/149‑1 (MQ=255)
                                                                                                                       ccTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAgg                         <  6:112413/149‑1 (MQ=255)
                                                                                                                             ccTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGa                                     <  2:264035/131‑1 (MQ=255)
                                                                                                                             ccTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGa                                     >  1:264035/1‑131 (MQ=255)
                                                                                                                             ccTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCggg                   <  1:84277/149‑1 (MQ=255)
                                                                                                                                     agGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGt           <  8:29364/149‑1 (MQ=255)
                                                                                                                                         cATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGc       >  8:274548/1‑149 (MQ=255)
                                                                                                                                             gactaccTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGCCGa    <  7:194216‑M2/141‑1 (MQ=255)
                                                                                                                                             gactaccTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGCCGa    <  6:2430‑M2/141‑1 (MQ=255)
                                                                                                                                              actaccTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGCCGAGt  <  2:44619‑M2/143‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                              
CTCGGCGAACTGGCCGCGGTAGACCTCGCCGTTCTGGCCATGCCATTCGCCCTGGCCGTGCCACTGGCCGTCCTTGAAGCTGCCGGCGTACCAGCTGCCGTTGGGGTAGTCGATCCGGCCCTCACCCTGCAGCAGGCCATCGACTACCTGCCCCCGGTAACGCCCACCGTCAGGCAGCCGTGCGTCGGGCGGGAGCAGCGATTCGCCATCGCCACAGGCGGCGAGCAGCAGGACCAGGGTAATGGGGAGCAGTGGACGCATGGCGAGGACCGGGCAATAGGTCTGCCGAGT  >  NC_002947/640289‑640579

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.