New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_002947 | = 893232 | 45 (0.790) | 4 (0.070) | 3/246 | NT | 8.2% | coding (483/2088 nt) | pta | phosphate acetyltransferase |
? | NC_002947 | = 893263 | 47 (0.880) | coding (452/2088 nt) | pta | phosphate acetyltransferase |
GGAAGTCATTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGACCACAACCAC > NC_002947/893120‑893411 | ggAAGTCATTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgacc < 2:317395‑M2/149‑6 (MQ=255) aGTCATTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCgg < 3:24341/149‑1 (MQ=255) gTCATTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGc > 8:320555/1‑149 (MQ=255) aTTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAg > 8:283378/1‑149 (MQ=255) ttACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGa < 2:294257/149‑1 (MQ=255) gcgcAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCt > 6:213004/1‑149 (MQ=255) agcaATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGGCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCt < 2:311470/149‑1 (MQ=255) caATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGa < 5:213004/149‑1 (MQ=255) tGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCa > 5:76906/1‑149 (MQ=255) tGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCa < 7:283378/149‑1 (MQ=255) gAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCATTGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCg > 1:48316/1‑139 (MQ=255) gAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCg < 2:48316/138‑1 (MQ=255) cTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgaccc < 3:252407‑M2/119‑7 (MQ=255) cTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgaccc > 4:252407‑M2/1‑113 (MQ=255) gcAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGAACCTTGTTGAGGATCACCCCCAGCACTTTCGGGGCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGATCACTTCGTTTTCCggg < 2:139561/149‑1 (MQ=255) aGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGc < 1:317395/149‑1 (MQ=255) ggTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATa < 1:239408/149‑1 (MQ=255) ggCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCa < 6:76906/149‑1 (MQ=255) gTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCt < 8:84769/114‑1 (MQ=255) gTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCt > 7:84769/1‑114 (MQ=255) gCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTc < 1:27367/149‑1 (MQ=255) ccA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCg < 3:265116/149‑1 (MQ=255) tctcGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCTCTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATc > 1:247292/1‑148 (MQ=255) tctcGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATc > 8:196301/1‑148 (MQ=255) tctcGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATc > 3:124951/1‑148 (MQ=255) tcgtcgGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGa < 2:196022/133‑1 (MQ=255) tcgtcgGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGa > 1:196022/1‑133 (MQ=255) aCCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCGGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGAtt < 2:281376/123‑1 (MQ=255) aCCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATAc > 4:310857/1‑116 (MQ=255) aCCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATAc < 3:310857/116‑1 (MQ=255) aCCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCAGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGAtt > 1:281376/1‑123 (MQ=255) gttaAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGc < 1:135477/148‑1 (MQ=255) gATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGa > 6:61003/1‑149 (MQ=255) ccccAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgacccgaaagtgctgggggtgatcctcaacaaggtgcgtaccgacgagagcatggcggacttcgccacccgcctgcgcgagcactcgccattgctgcg < 5:138926‑M2/149‑100 (MQ=255) cccAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCgcgc > 5:299132/1‑149 (MQ=255) aGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGc > 3:275538/1‑149 (MQ=255) aCTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCg > 2:319812/1‑147 (MQ=255) tttCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgacccgaaagtgctgggggtgatcctcaacaaggtgcgtaccgacgagagcatggcg > 1:193518‑M2/1‑41 (MQ=255) tttCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgacccgaaagtgctgggggtgatcctcaacaaggtgcgtaccgacgagagcatggcg < 2:193518‑M2/99‑59 (MQ=255) tttCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTcgacccgaaagtgctgggggtgatcctcaacaaggtgagtaccgacgagagcatggcggacttcgccacccgcctgcgcgagcactcgccattgctgcgcggtaatga < 5:258062‑M2/149‑109 (MQ=255) tttCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGc > 2:229120/1‑149 (MQ=255) gggTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCtggc < 4:275538/149‑1 (MQ=255) gTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGCTACCAGGATTACCTCGGCATCCAGGATCTTGGCCTGGTGCAGGTTGACCCGCGCTGCGTAGCtggcgt > 8:122353/1‑149 (MQ=255) gggcgccAAACAGTGGGGCCTGCAGTGCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTCCCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTg < 5:64507/146‑1 (MQ=255) gccgccAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAg < 6:287537/108‑1 (MQ=255) gccgccAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAg > 5:287537/1‑108 (MQ=255) gccgccAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTgg > 1:279670/1‑149 (MQ=255) aaaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCtggc < 6:150857/132‑1 (MQ=255) aaaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCtggc > 5:150857/1‑132 (MQ=255) aaaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCa > 1:153757/1‑149 (MQ=255) aaaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCa > 5:339415/1‑149 (MQ=255) aaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCa < 2:324976/148‑1 (MQ=255) aaCAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCa > 1:324976/1‑148 (MQ=255) gggCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGGTGGCGTGGCGCGTGGGCACCATTCCCTc < 6:339415/148‑1 (MQ=255) gggCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCg > 5:43947/1‑149 (MQ=255) ggCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGa < 7:196301/149‑1 (MQ=255) ccTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGAc > 2:325986/1‑148 (MQ=255) aGTTcgacccgaaagtgctgggggtgatcctcaacaaggtgcgtaccgacgagagcatggcggacttcgccacccgcctgcgcgagcactcgccattgctgcgcggtaatgacttccgcctgcttggctgcatcccctaccagcccgag > 6:138926‑M2/1‑4 (MQ=255) ttCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGACCACAACCa > 1:246412/1‑149 (MQ=255) tCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGACCACATCCAc > 3:50472/1‑149 (MQ=255) | GGAAGTCATTACCGCGCAGCAATGGCGAGTGCTCGCGCAGGCGGGTGGCGAAGTCCGCCA‑TGCTCTCGTCGGTACGCACCTTGTTGAGGATCACCCCCAGCACTTTCGGGTCGCGTGGGCCGCCAAACAGTTGGGCCTGCAGTTCGACCCGGCCAGACAGCTCGCTGAGCACTTCGTTTTCCGGGGCCGATACCAGGATTACCTCGGCATCCAGGCTCTTGGCCAGGTGCAGGTTGACCCGCGCTGCGTAGCTGGCGTGGCGCGTGGGCACCATTCCCTCGACCACAACCAC > NC_002947/893120‑893411 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |