BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	1441690 =	NA (NA)	6 (0.140) +AGAACTGCGCATCACTTACTGATTTAGCAG	3/200	NT	6.1%	intergenic (+34/+398)	PP_1260/ghrB	transposase/2‑ketoaldonate reductase/hydroxypyruvate/glyoxylate reductase
*	?	NC_002947	= 2301586	121 (2.130)	6 (0.140) +AGAACTGCGCATCACTTACTGATTTAGCAG	3/200	NT	6.1%	intergenic (‑230/‑101)	sbcD/PP_5497	exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein

Only 100 of 139 total aligned reads displayed.

GGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCAAGCGG  >  NC_002947/2301443‑2301734

gctgggtgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCt                                                                                                                                                  <  6:283568‑M1/139‑1 (MQ=255)

      tgatCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTg                                                                                                                                            >  5:40853‑M1/5‑149 (MQ=255)

        atCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCGCCCCCCTGGCCCACGCttgccggg                                                                                                                                           <  2:344585‑M1/146‑4 (MQ=255)

             tcATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtttt                                                                                                                                     >  7:146027/1‑149 (MQ=255)

               aTAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTg                                                                                                                                   >  8:326636/1‑149 (MQ=255)

                 aGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGt                                                                                                                                  >  8:58920/1‑148 (MQ=255)

                  gaccTGCGCATCTCTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑Ca                                                                                                                               <  2:73154/146‑1 (MQ=255)

                        cgcATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGtc                                                                                                                         >  5:215171/1‑149 (MQ=255)

                          cATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGTCCctgctaaatcagtaagtgatgcgcagttcta                                                                                                                        <  2:99690‑M2/149‑32 (MQ=255)

                           aTCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑Ca                                                                                                                               >  4:81429/1‑140 (MQ=255)

                            tCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGc                                                                                                                     >  3:148484/1‑149 (MQ=255)

                               cTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGt                                                                                                                  <  7:305635/149‑1 (MQ=255)

                                ttACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGtt                                                                                                                 >  7:247110/1‑149 (MQ=255)

                                  aCTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGa                                                                                                               >  3:13237/1‑149 (MQ=255)

                                    tGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGGGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGc                                                                                                                                                   >  4:329879/1‑112 (MQ=255)

                                    tGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGGGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGc                                                                                                                                                   <  3:329879/112‑1 (MQ=255)

                                    tGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCAGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGAtt                                                                                                             >  7:58926/1‑149 (MQ=255)

                                     gATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCgcaatcaa                                                                                                            >  6:299074/1‑142 (MQ=255)

                                      aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtttt                                                                                                                                     >  6:352148/1‑124 (MQ=255)

                                      aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtttt                                                                                                                                     <  5:352148/124‑1 (MQ=255)

                                      aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCAtttt                                                                                                                                     <  5:52930/124‑1 (MQ=255)

                                      aTTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGAtt                                                                                                             <  5:283568/147‑1 (MQ=255)

                                        ttAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTgcgg                                                                                                         >  7:310291/1‑149 (MQ=255)

                                          aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGt                                                                                                                  >  3:244935/1‑138 (MQ=255)

                                          aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGt                                                                                                                  <  4:244935/138‑1 (MQ=255)

                                          aGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTgcggc                                                                                                        <  3:222782/148‑1 (MQ=255)

                                           gCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTgcggcg                                                                                                       <  8:146027/148‑1 (MQ=255)

                                              gggACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGaaa                                                                                                   <  8:310291/149‑1 (MQ=255)

                                                 aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAt                                                                                                >  2:212402/1‑149 (MQ=255)

                                                 aCCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTACCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAAt                                                                                                <  8:58926/149‑1 (MQ=255)

                                                   ccTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGTCCctgctaaatcagtaagtgatgcgcagttctatgaga                                                                                                                   >  7:150757‑M2/1‑93 (MQ=255)

                                                      gtgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTgtgt                                                                                           >  8:340945/1‑149 (MQ=255)

                                                       tgGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGtt                                                                                          <  4:13237/149‑1 (MQ=255)

                                                         ggAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTc                                                                                         <  7:13128/148‑1 (MQ=255)

                                                         ggAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTc                                                                                         <  8:228233/148‑1 (MQ=255)

                                                           aGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCt                                                                                                                                                  >  4:269333/1‑90 (MQ=255)

                                                               ggCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCaaa                                                                                  >  2:307100/1‑149 (MQ=255)

                                                                gCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAAc                                                                                 <  5:28633/149‑1 (MQ=255)

                                                                  gTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACCTGGTCCctgctaaatcagtaagtgatgcgcagttctatgagagatcacccagcccttccgggctgcgctgtcgca                                                                                  <  5:218417‑M2/147‑70 (MQ=255)

                                                                  gTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGTCCctgctaaatcagtaagtgatgcgcagttctatgagagatcacccagcccttccgggctgcgctgtcgcaca                                                                                <  8:154304‑M2/149‑72 (MQ=255)

                                                                    gCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTAc                                                                              >  4:65619/1‑148 (MQ=255)

                                                                      ccGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACCTGGACCCCGCGTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAaacaacaac                                                                           >  3:144773/1‑149 (MQ=255)

                                                                      ccGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAGGGTCCctgctaaatcagtaagtgatgcgcagttctatgagagatcacccagcccttccgggctgcgctgtcgcacagca                                                                             <  6:131838‑M2/148‑75 (MQ=255)

                                                                      ccGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACAAGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAAc                                                                           >  1:336878/1‑149 (MQ=255)

                                                                       cgcgAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACt                                                                          >  2:223809/1‑149 (MQ=255)

                                                                        gcgAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTg                                                                         >  7:31863/1‑149 (MQ=255)

                                                                        gcgAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTg                                                                         >  6:221706/1‑149 (MQ=255)

                                                                         cgAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTgg                                                                        <  5:312609/149‑1 (MQ=255)

                                                                         cgAAGAATCCAACGCGGTACATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTgg                                                                        >  7:103853/1‑149 (MQ=255)

                                                                           aagaaTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCt                                                                      <  4:167561/149‑1 (MQ=255)

                                                                             gaaTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCa                                                                    <  7:37840/149‑1 (MQ=255)

                                                                               aTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAg                                                                                      >  2:64800/1‑129 (MQ=255)

                                                                               aTCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAg                                                                                      <  1:64800/129‑1 (MQ=255)

                                                                                tCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACtt                                                                 >  8:271598/1‑149 (MQ=255)

                                                                                tCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACtt                                                                 >  2:105370/1‑149 (MQ=255)

                                                                                  cAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGt                                                               <  7:271598/149‑1 (MQ=255)

                                                                                  cAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGt                                                               <  6:295366/149‑1 (MQ=255)

                                                                                   aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTa                                                              >  5:338482/1‑149 (MQ=255)

                                                                                   aaCGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTa                                                              <  1:307100/149‑1 (MQ=255)

                                                                                     cgcgGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTAt                                                             >  5:69146/1‑148 (MQ=255)

                                                                                         gTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGc                                                        <  6:215171/149‑1 (MQ=255)

                                                                                             aTGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAgg                                                    <  1:212402/149‑1 (MQ=255)

                                                                                               ggCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTa                                                              <  5:181777/137‑1 (MQ=255)

                                                                                                 cACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGAt                                                >  8:265949/1‑149 (MQ=255)

                                                                                                  aCCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATg                                               <  8:136585/149‑1 (MQ=255)

                                                                                                  aCCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATg                                               <  6:69146/149‑1 (MQ=255)

                                                                                                    cGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGc                                             <  6:338482/149‑1 (MQ=255)

                                                                                                          cgcCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCtt                                       <  5:157327/149‑1 (MQ=255)

                                                                                                               gtgtTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTc                                                                                         <  3:78431/94‑1 (MQ=255)

                                                                                                                tgtTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGcaca                                 <  4:148484/149‑1 (MQ=255)

                                                                                                                  ttCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTgg                                     >  3:309990/1‑143 (MQ=255)

                                                                                                                  ttCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTgg                                     <  4:309990/143‑1 (MQ=255)

                                                                                                                  ttCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAg                                <  6:173160/148‑1 (MQ=255)

                                                                                                                  ttCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAg                                <  7:340945/148‑1 (MQ=255)

                                                                                                                  ggagcgGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAgg                               >  1:48198/4‑149 (MQ=255)

                                                                                                                    cgcgGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGt                              <  8:103853/148‑1 (MQ=255)

                                                                                                                     gcgGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCt                            >  4:102232/1‑149 (MQ=255)

                                                                                                                      cgGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCta                           <  3:88999/149‑1 (MQ=255)

                                                                                                                       gggCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTGGGCACAGGTCta                           >  4:53000/1‑148 (MQ=255)

                                                                                                                        ggCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCtata                         <  3:65619/149‑1 (MQ=255)

                                                                                                                           gcgcCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAg                      <  6:343312/149‑1 (MQ=255)

                                                                                                                            cgcCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGc                     <  1:223809/149‑1 (MQ=255)

                                                                                                                             gcCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCa                    >  4:23745/1‑149 (MQ=255)

                                                                                                                               ccGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTa                                                                               <  6:139702/88‑1 (MQ=255)

                                                                                                                               ccGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTa                                                                               >  5:139702/1‑88 (MQ=255)

                                                                                                                               ccGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCtat                          <  6:179580/141‑1 (MQ=255)

                                                                                                                               ccGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCtat                          >  5:179580/1‑141 (MQ=255)

                                                                                                                                cGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATAc                 <  6:248020/149‑1 (MQ=255)

                                                                                                                                 gCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACg                >  5:356411/1‑149 (MQ=255)

                                                                                                                                 gCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTAGCACAGGTCTATACAGCATACg                >  7:60840/1‑149 (MQ=255)

                                                                                                                                     ccACATGGACCACGCTTGCCTGGCATTTTTGTGCAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACggg              >  1:42514/1‑148 (MQ=255)

                                                                                                                                     ccACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACggg              <  5:23766/147‑1 (MQ=255)

                                                                                                                                     ccACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTa            >  6:187852/1‑149 (MQ=255)

                                                                                                                                     ccACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTa            <  1:105370/149‑1 (MQ=255)

                                                                                                                                       acaTGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGt                                                               >  4:48752/1‑96 (MQ=255)

                                                                                                                                       acaTGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGt                                                               <  3:44010/96‑1 (MQ=255)

                                                                                                                                        caTGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTc                             >  5:339858/1‑129 (MQ=255)

                                                                                                                                        caTGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTc         >  6:16946/1‑149 (MQ=255)

                                                                                                                                               cACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGcacgg                                >  8:163755/1‑117 (MQ=255)

                                                                                                                                               cACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGcacgg                                <  7:163755/119‑3 (MQ=255)

GGCAAGCCAGCTCTCATAGAACTGCGCATCACTTACTGATTTAGCAGGGACCCTGTGGGAGCGGGCGTGCCCGCGAAGAATCCAACGCGGTGCATGGCACCGGCTGCGCCGGTGTTCGCGGGCGCGCCCGCTCCCACATGGACCACGCTTGCCTGGCATTTTTGT‑CAGTTGTCTCGCCGTTGATTGCGGCGGAAAAATTGTGTTCGAGCAAACTACAACTGGCTCACTTGTATGAGGCTAGGCGATGGCGACCTTGGCACAGGTCTATACAGCATACGGGTACTCCAAGCGG  >  NC_002947/2301443‑2301734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 21 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.