| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2032810 = | NA (NA) | 3 (0.060) | 3/248 | NT | 19.5% | coding (291/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase |
| ? | NC_002947 | 2032835 = | 13 (0.230) | coding (316/1665 nt) | pgi‑I | glucose 6‑phosphate isomerase | |||||
TCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAA > NC_002947/2032688‑2032983 | tCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCg > 8:174908/1‑149 (MQ=34) tagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCTGcc > 7:229874‑M2/145‑149 (MQ=255) tagccgcgccacaggccatcgtgaatgcgaccaaccagttcggtaatctggttgagcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGcc > 4:150598‑M2/145‑149 (MQ=255) aaaaCCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGATGTGGGCCTGCAGGACGACATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCt > 6:155203/1‑149 (MQ=17) cTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAgg > 2:308016/1‑149 (MQ=32) aTCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGt < 3:189217/147‑1 (MQ=32) aTCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGa < 8:264956/149‑1 (MQ=32) atcGAGCTAAGCCGCGATCTGCTGGTCAACCTGGCCAATGATGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAAGGCCTCGGAAGTCCGTCCGGTGCTGCACACCGCCTTGCGCCGGcgt < 6:367080/136‑3 (MQ=11) aCCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACa < 1:308016/148‑1 (MQ=32) aCCGAGCAAAGCCGCGATCTGCAGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCt > 5:367080/1‑138 (MQ=17) ccGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGTACGCCATCATGTCGATGTTCAGCGGTGAGATCATCAGCGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCGGGCCTGAAGGTGAGaaa > 8:229874/1‑149 (MQ=11) gAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACt < 7:174908/149‑1 (MQ=32) ctgGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGc < 6:297222/144‑1 (MQ=32) ctgGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGt < 3:351536/146‑1 (MQ=32) gTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGt < 5:226464/149‑1 (MQ=32) aaCCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCAt > 2:159696/1‑149 (MQ=32) aaCCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCAt > 6:333106/1‑149 (MQ=32) agcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc < 4:205245‑M2/4‑1 (MQ=255) agcaccttgtgcacttccggcatgacgttcacgccgttgacgctgagtttgtcacctacaggccggcgcaaggcggtgtgcagcaccggaCGGc > 3:205245‑M2/91‑94 (MQ=255) tacaggccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGcgcg > 7:340860‑M2/35‑149 (MQ=255) gccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGa < 6:12294‑M2/101‑1 (MQ=255) gccggcgcaaggcggtgtgcagcaccggaCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGa > 5:12294‑M2/30‑130 (MQ=255) CGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCaa < 7:263950‑M2/149‑1 (MQ=255) | TCAAAAAACCTGATCACCGAGCAAAGCCGCGATCTGCTGGTCAACCTGGCCAATGAAGTGGGCCTGCAGGACGCCATCAAGTCGATGTTCAGCGGTGAGATCATCAACGCCTCCGAAGGCCGTCCGGTGCTGCACACCGCCTTGCGCCGGCCTGTAGGTGACAAACTCAGCGTCAACGGCGTGAACGTCATGCCGGAAGTGCACAAGGTGCTCAACCAGATTACCGAACTGGTTGGTCGCATTCACGATGGCCTGTGGCGCGGCTACAGCGAAAAGCCGATCACCGACGTGGTCAA > NC_002947/2032688‑2032983 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |