| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_002947 | 2301453 = | 0 (0.000) | 78 (1.410) | 62/254 | NT | 100% | intergenic (‑97/‑234) | sbcD/PP_5497 | exonuclease subunit SbcD/rhs repeat‑associated core domain‑containing protein |
| ? | NC_002947 | 2925429 = | NA (NA) | intergenic (‑177/+388) | PP_2563/PP_2564 | antibiotic biosynthesis protein/quercetin 2,3‑dioxygenase | |||||
CTGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC > NC_002947/2925283‑2925569 | ctggctggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATc < 7:37613/149‑1 (MQ=255) tggTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCAcc > 3:285554/1‑147 (MQ=255) gTAGCACAACGCTAGTGCAGGCTGGCTGTTGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGc > 1:203814/1‑149 (MQ=255) gTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGc > 5:141006/1‑149 (MQ=255) gTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTgcg > 6:314574/1‑149 (MQ=255) gTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTg < 4:178424/147‑1 (MQ=255) gctggctgATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCg > 3:140108/1‑149 (MQ=255) aTGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGc < 5:215906/147‑1 (MQ=255) gcgcCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACa < 3:163464/149‑1 (MQ=255) aaTATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATg > 1:115041/1‑149 (MQ=255) tttGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCa > 3:137038/1‑149 (MQ=255) tttGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCa < 3:345978/149‑1 (MQ=255) ttGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCAt > 8:168934/1‑149 (MQ=255) aaGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaaa > 5:244785/1‑134 (MQ=255) aaGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCaaa < 6:244785/134‑1 (MQ=255) ggCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGt < 2:303951/149‑1 (MQ=255) ccTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGAt < 2:115041/149‑1 (MQ=255) cGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCa < 4:285554/149‑1 (MQ=255) gggCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATc < 6:141006/149‑1 (MQ=255) ggCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCg < 4:137038/149‑1 (MQ=255) cAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATc > 2:154160/1‑146 (MQ=255) gTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGTGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCgagagc > 5:316976/1‑147 (MQ=255) tCCATGGCCGGAAGCGTGCCCCCATAAAACCCTTCTAACCCGTAGGGTTATCGGTTTTTCCATTGGAGTTCAACCATCCCTTCCGGGCTGCGCTGTCGCAAATCAAACAGGATGACGCATGACGTCAGATCTGCACTGACATCGAGAt < 1:231871/148‑1 (MQ=18) tCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGAt > 2:231871/1‑147 (MQ=255) ccAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGCTCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATc > 5:202999/1‑147 (MQ=255) cAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATc > 5:296915/1‑146 (MQ=255) cAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATc > 8:309402/1‑146 (MQ=255) cAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTa < 6:296915/148‑1 (MQ=255) aGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAg > 2:265565/1‑148 (MQ=255) gggCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGa > 1:234415/1‑148 (MQ=255) ggCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGaaa < 7:309402/149‑1 (MQ=255) gCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCa < 5:320907/149‑1 (MQ=255) cGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGc < 2:203814/149‑1 (MQ=255) aaaaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACAt < 6:252752/116‑1 (MQ=255) aaaaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACAt > 5:252752/1‑116 (MQ=255) aaCCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCggg > 8:1539/1‑149 (MQ=255) tGCAAACCCGACGGGTTAGCGGTTGTTCCATGGGAGAACACCCAGCCCTTGCGGGCTGCGCTGTCGCACAGCAAACACGATG‑CGCATGACGTCAGTTCAGCACAGACTTCGAGAACATGAAAAGCATTCGCCGACTGATCCGGGTAGGt > 6:172422/1‑149 (MQ=17) cgCTAACCCGTCGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTGGCCGACTGATCCGGGTa < 2:118505/145‑1 (MQ=255) cgCTAACCCGTCGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTa > 1:118505/2‑146 (MQ=255) cTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTc < 4:140108/148‑1 (MQ=255) aCCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgcc > 7:177361/1‑149 (MQ=255) cGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAgccgcc < 7:168934/149‑1 (MQ=255) gTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCATAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATAc > 5:320500/1‑149 (MQ=255) gTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCATCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCAGCCGAATAc > 3:278400/1‑149 (MQ=255) gCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTg > 5:196697/1‑149 (MQ=40) gCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTg < 8:177361/149‑1 (MQ=40) cGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGc > 2:315075/1‑149 (MQ=39) tgttCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATg > 1:136003/1‑149 (MQ=37) gttCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATgg > 2:158023/1‑149 (MQ=35) tCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGtt > 3:118509/1‑149 (MQ=34) cATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTg < 3:62680/139‑1 (MQ=33) cATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTg > 4:62680/1‑139 (MQ=33) cATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTcc > 1:347531/1‑149 (MQ=32) | CTGGCTGGTAGCACAACGCTAGTGCAGGCTGGCTGATGGCGCCAATATTTGAAGGCTGCCTTGCGATAGCCGGGCAGGTCCAGGGCCGCAAGCGTGCCCCCATAAAACCCTGCTAACCCGACGGGTTAGCGGTTGTTCCATGGGAGATCACCCAGCCCTTCCGGGCTGCGCTGTCGCACAGCAAACAGGATG‑CGCATGACGTCAGATCTGCACTGACATCGAGATCTAGAAAAGCATTCGCCGACTGATCCGGGTAGGTCAGCCGCCGAATACTTTGCTATGGTTCC > NC_002947/2925283‑2925569 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |