New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5690244 =	59 (1.040)	3 (0.060)	3/246	NT	4.9%	coding (99/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG
	?	NC_002947	5690320 =	61 (1.140)					coding (23/402 nt)	pilG	pilus biosynthesis/twitching motility protein PilG
Rejected: Frequency below/above cutoff threshold.

AGCACATCGACGAAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGCAGCTGCATTTTTAG  >  NC_002947/5690173‑5690463                                                                                                                                                    |                                                                                                                                                cagcttgccgcttgcaacttgcggcttcaatcctactggtaggcgtctatggaacaacccctgaaggtgatGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccat                                                                                                                                                >  6:246652‑M1/72‑149 (MQ=255)  gCACATCGACGAAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccat                                                                                                                                                >  5:104133/1‑148 (MQ=255)  agcttgccgcttgcaacttgcggcttcaatcctactggtaggcgtctatggaacaacccctgaaggtgatGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccatc                                                                                                                                               >  6:301395‑M1/71‑149 (MQ=255)   cacaTCGACGAAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccatca                                                                                                                                              >  6:206159/1‑149 (MQ=255)   cacaTCGACGAAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccatca                                                                                                                                              >  8:194298/1‑149 (MQ=255)         gacgaAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCtt                                                                                                                                          >  3:43991/1‑147 (MQ=255)         gacgaAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCa                                                                                                                                        <  7:194314/149‑1 (MQ=255)            gaAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAggg                                                                                                                                     >  7:211761/1‑149 (MQ=255)            gaAAATGATACTGGGCGGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAggg                                                                                                                                     <  2:72404/149‑1 (MQ=255)                   aTACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGgttgtt                                                                                                                               <  1:179420/148‑1 (MQ=255)                   aTACTGCGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGgttgtt                                                                                                                               <  2:115879/148‑1 (MQ=255)                    tACTGGGCTGATGGTCGACGCTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTcc                                                                                                                             <  2:130766/149‑1 (MQ=255)                    tACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTcc                                                                                                                             <  2:60606/149‑1 (MQ=255)                    tACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTcc                                                                                                                             <  4:344506/149‑1 (MQ=255)                    tACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTcc                                                                                                                             <  7:194298/149‑1 (MQ=255)                    tACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTc                                                                                                                              >  6:96989/1‑148 (MQ=255)                       tGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAg                                                                                                                                       <  2:261441/136‑1 (MQ=255)                       tGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAg                                                                                                                                       >  1:261441/1‑136 (MQ=255)                        gggCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccatca                                                                                                                                              >  2:91122/1‑128 (MQ=255)                        gggCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGatcaccatca                                                                                                                                              <  1:91122/128‑1 (MQ=255)                           cTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACg                                                                                                                      >  4:12585/1‑149 (MQ=255)                               tGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTa                                                                                                                  >  7:337844/1‑149 (MQ=255)                                   cgacgaTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAg                                                                                                              >  2:307592/1‑149 (MQ=255)                                    gacgaTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTTCATAGACGCCTACCAg                                                                                                              >  3:300405/1‑148 (MQ=255)                                    gacgaTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAg                                                                                                              >  2:174681/1‑148 (MQ=255)                                     acgaTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAg                                                                                                              >  2:161237/1‑147 (MQ=255)                                      cgaTCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAg                                                                                                           <  1:307592/149‑1 (MQ=255)                                             ggCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTg                                                                                                      <  8:211761/147‑1 (MQ=255)                                             ggCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGa                                                                                                     <  5:206159/148‑1 (MQ=255)                                              gCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGaa                                                                                                    <  1:189395/148‑1 (MQ=255)                                               ccAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGc                                                                                                  >  5:57365/1‑149 (MQ=255)                                               ccAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGc                                                                                                  >  8:5885/1‑149 (MQ=255)                                                cAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGcc                                                                                                 >  1:18965/1‑149 (MQ=255)                                                     cATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGaa                                                                                                    >  6:325880/1‑141 (MQ=255)                                                     cATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGaa                                                                                                    <  5:325880/141‑1 (MQ=255)                                                             ccATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGc                                                                                    >  1:265523/1‑149 (MQ=255)                                                             ccATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGc                                                                                    <  4:43991/149‑1 (MQ=255)                                                              cATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCg                                                                                   <  6:104133/149‑1 (MQ=255)                                                                  gCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCTGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCaa                                                                               <  1:71756/149‑1 (MQ=255)                                                                   cTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGAGGCAAGCGGCAAg                                                                              >  1:124224/1‑149 (MQ=255)                                                                     gatggtgatcgacgattcccgcacgatccgccgcaccgcgcagatgttgctcggtgaagcgggctgcgaggtgatcaccATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCt                                                                            >  6:301395‑M2/80‑149 (MQ=255)                                                                      atggtgatcgacgattcccgcacgatccgccgcaccgcgcagatgttgctcggtgaagcgggctgcgaggtgatcaccATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTg                                                                           >  6:246652‑M2/79‑149 (MQ=255)                                                                       cGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGc                                                                          <  7:5885/149‑1 (MQ=255)                                                                         GTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCaa                                                                        >  5:96989‑M1/1‑149 (MQ=255)                                                                          TGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAg                                                                       >  7:58246‑M1/1‑149 (MQ=255)                                                                               aCCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGAc                                                                                                                       >  8:18482/1‑96 (MQ=255)                                                                                ccTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAag                                                                   >  4:136212/1‑147 (MQ=255)                                                                                   cGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGTAAGCGGCAAGCt                                                                            <  6:224516/135‑1 (MQ=255)                                                                                   cGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGTAAGCGGCAAGCt                                                                            >  5:224516/1‑135 (MQ=255)                                                                                     cAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCg                                                            <  5:213557/149‑1 (MQ=255)                                                                                       gCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGgc                                                          <  1:174681/149‑1 (MQ=255)                                                                                        cccGCTTCACCGAGCAACAACAGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACAATCACCTTCAGCCGATCTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGAAAGAAATCAGCTCggag                                                         >  8:253297/1‑147 (MQ=255)                                                                                          cGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTTCATAGACGCCTACCAGTAGGATTGAAGCCGCGAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCa                                                       <  4:300405/149‑1 (MQ=255)                                                                                            cTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATg                                                     <  6:57365/149‑1 (MQ=255)                                                                                               cACCGCGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGAt                                                  >  1:35021/1‑149 (MQ=255)                                                                                               cACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATgg                                                    <  2:124224/147‑1 (MQ=255)                                                                                                       taCATCTGCGCGGTGCGGCGGATCGTGCGGTAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGTCGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAagca                                                                 <  5:280894/125‑1 (MQ=255)                                                                                                       aaCATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATAACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGAATGAAGCCGCAACTTGCAAGCGGCAAGCTGCAACAAagaa                                                                 >  6:280894/1‑124 (MQ=255)                                                                                                          aTCTGCGCGGTTCGGCGGATCGTGCGGGAAGCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCtt                                       <  3:223296/149‑1 (MQ=255)                                                                                                            gcagatgttgctcggtgaagcgggctgcgaggtgatcaccATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGa                                     <  5:246652‑M2/109‑1 (MQ=255)                                                                                                               cgcgGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGa                                     <  3:241929/146‑1 (MQ=255)                                                                                                                gcgGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCt                                 <  3:74819/149‑1 (MQ=255)                                                                                                                   gTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGt                              <  2:286340/149‑1 (MQ=255)                                                                                                                     gcggcgGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGgcg                                                         <  3:314607/120‑1 (MQ=255)                                                                                                                     gcggcgGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGgcg                                                         >  4:314607/1‑120 (MQ=255)                                                                                                                         cggATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCa                        <  3:12585/149‑1 (MQ=255)                                                                                                                            aTCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTc                                         >  8:236729/1‑129 (MQ=255)                                                                                                                             tCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGc                    >  2:217713/1‑149 (MQ=255)                                                                                                                               gTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGctc                                              >  4:121628/1‑121 (MQ=255)                                                                                                                               gTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGctc                                              <  3:121628/121‑1 (MQ=255)                                                                                                                               gTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCtt                  >  4:311843/1‑149 (MQ=255)                                                                                                                                  cGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGc                <  3:136212/148‑1 (MQ=255)                                                                                                                                   gggAATCGTCGATCGCCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGCAg              >  3:46453/1‑149 (MQ=255)                                                                                                                                             gatcaccATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGCAGCTGCAtttt     <  8:337844‑M2/141‑1 (MQ=255)                                                                                                                                               tcaccATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGCAGCTGCATTTTTAg  >  8:30299‑M2/6‑149 (MQ=255)                                                                                                                                                   cATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGTAGCTGCATTTTTAg  >  5:191045‑M2/2‑145 (MQ=255)                                                                                                                                                   cATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGTAGCTGCATTTTTAg  <  6:191045‑M2/144‑1 (MQ=255)                                                                                                                                                    |                                                                                                                                                AGCACATCGACGAAAATGATACTGGGCTGATGGTCGACGATCTTGGCCAGGGCATCGAAGCCATCGCTGGCGGTGATCACCTCGCAGCCCGCTTCACCGAGCAACATCTGCGCGGTGCGGCGGATCGTGCGGGAATCGTCGATCACCATCACCTTCAGGGGTTGTTCCATAGACGCCTACCAGTAGGATTGAAGCCGCAAGTTGCAAGCGGCAAGCTGCAAGAAAGCAGCTCGGCGCATGGATGCTCTTTTCTTGAGGCTTGTAGCTCAAGGCTTGCAGCTGCATTTTTAG  >  NC_002947/5690173‑5690463

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.