New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	= 5833298	41 (0.720)	5 (0.090)	5/246	NT	11.1%	coding (924/1356 nt)	PP_5112	peptidase
	?	NC_002947	= 5833324	41 (0.760)					coding (950/1356 nt)	PP_5112	peptidase

CAAGCCTGATCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAAGAGCACGC  >  NC_002947/5833177‑5833470                                                                                                                                                    |                                                                                                                                                   cAAGCCTGATCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTg                                                                                                                                                   >  5:8645‑M2/1‑148 (MQ=255)    gCCTGATCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggcc                                                                                                                                                >  2:55547‑M2/1‑145 (MQ=255)       tGATCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggc                                                                                                                                             <  1:229402‑M2/149‑8 (MQ=255)         aTCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggc                                                                                                                                             >  7:170494‑M2/1‑140 (MQ=255)                gCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTcc                                                                                                                                    <  8:311205/149‑1 (MQ=255)                     aaagTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCGCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTa                                                                                                                               <  8:328030/146‑1 (MQ=255)                         tGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAAc                                                                                                                           <  2:229402/149‑1 (MQ=255)                            ccGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGcc                                                                                                                        >  3:28699/1‑149 (MQ=255)                            ccGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGcc                                                                                                                        <  2:218974/149‑1 (MQ=255)                                        ccGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCgcggc                                                                                                            <  4:28699/149‑1 (MQ=255)                                         cGCCAAGGACCCTCGGACGGTACATGCCCTGAGCCTGATCTCGGCTCTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCgcggc                                                                                                            >  7:162180/1‑148 (MQ=255)                                             aaGGACCCTCGGACGGTACATGCCCTGCGCCGGATCGCGGCACTGCTCGCCGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCCTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTGCACCCGCGGCGAccg                                                                                                       >  5:274963/1‑147 (MQ=255)                                                 aCCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTg                                                                                                   <  3:187572/149‑1 (MQ=255)                                                        gACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGTCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGa                                                                                            <  1:28270/149‑1 (MQ=255)                                                        gACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGa                                                                                            >  8:322109/1‑149 (MQ=255)                                                              aCATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCgg                                                                                      >  4:168869/1‑149 (MQ=255)                                                                  gCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGAc                                                                                  >  7:222010/1‑149 (MQ=255)                                                                     cTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGcc                                                                               >  7:199575/1‑149 (MQ=255)                                                                     cTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGcc                                                                               >  8:2255/1‑149 (MQ=255)                                                                          ccTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAAtg                                                                          >  4:61194/1‑149 (MQ=255)                                                                           cTGATCTGGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCTGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAAtgt                                                                         <  8:173500/149‑1 (MQ=255)                                                                                  cGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTgcagaag                                                                  >  3:131918/1‑149 (MQ=255)                                                                                   ggCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTgcagaa                                                                   <  8:199575/147‑1 (MQ=255)                                                                                      aCTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACACCGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTgcagacgactg                                                              >  1:310223/1‑143 (MQ=255)                                                                                          cTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGaaaa                                                           <  3:168869/148‑1 (MQ=255)                                                                                                 gcggcTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGcc                                                   >  1:8198/1‑149 (MQ=255)                                                                                                        cAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCCCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTc                                             >  8:69733/1‑148 (MQ=255)                                                                                                          gcgcCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCgag                                          <  2:8198/149‑1 (MQ=255)                                                                                                              ccGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGc                                                                                     >  1:349200/1‑102 (MQ=255)                                                                                                              ccGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGc                                                                                     <  2:349200/102‑1 (MQ=255)                                                                                                               cGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaagccg                                       <  8:38528‑M2/147‑110 (MQ=255)                                                                                                                    gCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCt                                >  2:270117/1‑149 (MQ=255)                                                                                                                     ccGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaagccgtagatcag                               <  8:294042‑M2/149‑118 (MQ=255)                                                                                                                      cGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaa                                           <  1:135689‑M2/136‑106 (MQ=255)                                                                                                                      cGGCCCGCCTGGAGCGTGGCCAGGAACTGGTggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaa                                           >  2:135689‑M2/1‑31 (MQ=255)                                                                                                                      cGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTgg                              >  3:296474/1‑149 (MQ=255)                                                                                                                      cGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTgg                              >  2:286350/1‑149 (MQ=255)                                                                                                                          ccGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATc                                 <  8:216955/142‑1 (MQ=255)                                                                                                                          ccGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATc                                 >  7:216955/1‑142 (MQ=255)                                                                                                                          ccGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAgc                          <  4:131918/149‑1 (MQ=255)                                                                                                                          ccGCCTGGAGCGTGGCAAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAgc                          >  4:263474/1‑149 (MQ=255)                                                                                                                                ggAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCtt                     >  7:182759/1‑148 (MQ=255)                                                                                                                                 gAGCATGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACCACGCCTTCACCCGCGGCGACAGCCGGTTCCTGAGCTCGGCGACGCCGAATGGGCAGAAGCAGAAACCCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCtt                     <  6:274963/147‑1 (MQ=255)                                                                                                                                  aGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTgaa                  <  1:270117/149‑1 (MQ=255)                                                                                                                                    cGTGGCCAGGAACTGGTggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaagccgtagatcaggcttggcagctgggt                >  7:38528‑M2/1‑17 (MQ=255)                                                                                                                                     gTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTgaagaa               <  1:286350/149‑1 (MQ=255)                                                                                                                                        gCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACt             <  4:296474/148‑1 (MQ=255)                                                                                                                                        gCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTc            <  7:2255/149‑1 (MQ=255)                                                                                                                                            ggAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCCCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAaga        <  7:69733/149‑1 (MQ=255)                                                                                                                                              aaCTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAAGAGc      <  3:61194/149‑1 (MQ=255)                                                                                                                                                 tggtggCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAAGAGCAcg   >  6:160635/1‑149 (MQ=255)                                                                                                                                                 gcgtggccggcatgcgggcgctgtagccgccgtcgagcagtgccgagatcaggcgcagggcatgtaccgtccgagggtccttggcggtgggcagaccgggcacgttgaagccgtagatcaggcttggcagctgggtgcgtacgtgcagg   >  7:157801‑M2/3‑4 (MQ=255)                                                                                                                                                  ggtggCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAAGAGCAcgc  >  1:156035/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                   CAAGCCTGATCTACGGCTTCAACGTGCCCGGTCTGCCCACCGCCAAGGACCCTCGGACGGTACATGCCCTGCGCCTGATCTCGGCACTGCTCGACGGCGGCTACAGCGCCCGCATGCCGGCCCGCCTGGAGCGTGGCCAGGAACTGGTGGCCGGCGCGTCGTCCAGCTACAACGCCTTCACCCGCGGCGACAGCCTGTTCCTGATCTCGGCGACGCCGAATGTGCAGAAGCAGAAAACCCTCGCCGACGTCGAGAAAGGCATCTGGCAGCTGCTTGAAGAACTCAAGAGCACGC  >  NC_002947/5833177‑5833470

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.