New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_002947	5864825 =	55 (0.970)	4 (0.070)	3/246	NT	7.8%	coding (1326/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase
	?	NC_002947	5864867 =	43 (0.800)					coding (1284/2253 nt)	cadA‑III	cadmium translocating P‑type ATPase

CCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAACAGCG  >  NC_002947/5864719‑5865009                                                                                                                                                     |                                                                                                                                               ccgcgccttggtgctgctggtggtggactgcccttgcgcgctggtgatctcgaccccggttaccatcttcagtggccttgccgccgccgcgcgcaaaggcatcctgATCAAGGTGGCGGCCACCCTCCAGCTACACGCCACCCTTGATc                                                                                                                                                >  1:109064‑M1/107‑149 (MQ=255)   gccAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACTGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAg                                                                                                                                              >  2:253830/1‑149 (MQ=255)              cgcACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTgc                                                                                                                                   <  5:365703/149‑1 (MQ=255)                gctggtggtggcctgcccgtgcgcgctggttatctcgaccccggtgaccatcgtcagtggcctggccgccgccgcgcgcaaaggcatcctgATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGAtcagtat                                                                                                                                           >  5:120168‑M1/92‑136 (MQ=255)                gctggtggtggcctgcccgtgcgcgctggtgatctcgaccccggtgaccatcgtcagtggcctggccgccgccgcgcgcaaaggcatcctgATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGAt                                                                                                                                           <  6:120168‑M1/48‑1 (MQ=255)                   ggTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGAt                                                                                                                                           <  2:30764/136‑1 (MQ=255)                           aaCAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCggcggcggc                                                                                                                      >  3:88086/1‑149 (MQ=255)                                  gcgcCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCggccaggcca                                                                                                               >  2:297188/1‑149 (MQ=255)                                   cgcCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCAc                                                                                                              <  7:281370/149‑1 (MQ=255)                                    gcCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACt                                                                                                             >  1:179003/1‑149 (MQ=255)                                       aGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGAc                                                                                                          >  4:195260/1‑149 (MQ=255)                                         cACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGa                                                                                                        <  5:57771/149‑1 (MQ=255)                                           ccTTGGCGTCGGTCTGCACTGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATg                                                                                                      <  1:253830/149‑1 (MQ=255)                                                  gTCGGTCTGCACCGGCTTGCCATGGCTGATAGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCg                                                                                               <  7:305229/149‑1 (MQ=255)                                                       tCTGCACCGGCTTGCCATGGTTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATGAATGTGTCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTc                                                                                          <  4:153753/149‑1 (MQ=255)                                                       tCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTc                                                                                          <  8:136709/149‑1 (MQ=255)                                                            aCCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGAc                                                                                                          >  3:84782/1‑128 (MQ=255)                                                            aCCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGAc                                                                                                          <  4:84782/128‑1 (MQ=255)                                                                 cTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCAc                                                                                  >  2:255895/1‑147 (MQ=255)                                                                    gCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgc                                                                              <  4:88086/148‑1 (MQ=255)                                                                    gCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgc                                                                              <  1:297188/148‑1 (MQ=255)                                                                      cATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgcgcg                                                                           >  6:155791/1‑149 (MQ=255)                                                                      cATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAACGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAgcgcg                                                                           >  1:68062/1‑149 (MQ=255)                                                                      cATGGGTGATGGTGCCGGTCTTGTCCAGGGACAGGAAATCAAGGTGGCGGCCACCCTCCAGGTCCACGCCACCCTTGATCAGGATCCCTTTGCGCGCGGCGGCGGCCAGGCCACTGCCGATGGTCACCGGGGTCGAGATCACCAgcgcg                                                                           >  8:290689/1‑149 (MQ=255)                                                                           gTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACgg                                                                      <  3:195260/149‑1 (MQ=255)                                                                            tGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACggg                                                                     <  7:256083/149‑1 (MQ=255)                                                                            tGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACggg                                                                     <  7:149887/149‑1 (MQ=255)                                                                                ggTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACATGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAgg                                                                 >  6:364396/1‑149 (MQ=255)                                                                                 gTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGc                                                                >  6:21634/1‑149 (MQ=255)                                                                                  tGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGCGTCGAGATCACCAGCGCGCACGGGCAGGc                                                                >  6:347324/1‑148 (MQ=255)                                                                                     cGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGccacc                                                            <  5:155791/149‑1 (MQ=255)                                                                                             tCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACcagca                                                     <  4:72189/148‑1 (MQ=255)                                                                                               cAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAgcagca                                                  >  2:119267/1‑149 (MQ=255)                                                                                                   gCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCAcc                                                >  5:256718/1‑147 (MQ=255)                                                                                                     cAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg                                             <  4:102965/148‑1 (MQ=255)                                                                                                     cAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAg                                             >  3:102965/1‑148 (MQ=255)                                                                                                     atcctgatcaagggtggcgtgtacctggagggtggccgccaccttgatCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACcagc                                                      <  6:120168‑M2/91‑1 (MQ=255)                                                                                                     atactgatcaagggtggcgtgtacctggagggtggccgccaccttgatCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATAACCAGCGCGCACGGGCAGGCCACCACcagc                                                      >  5:120168‑M2/49‑139 (MQ=255)                                                                                                          gatcaagggtggcgtgtagctggagggtggccgccaccttgatCAGGATGCCTTTGCGCGCGGCGGCGGCAAGGCCACTGAAGATGGTAACCGGGGTCGAGATCACCAGCGCGCAAGGGCAGTCCACCACCAGCAGCACCAAGGCGCgg                                       >  1:109064‑M2/44‑149 (MQ=255)                                                                                                          aaTCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCgg                                       <  2:362895/149‑1 (MQ=255)                                                                                                              aagggtggcgtgtacctggagggtggccgccaccttgatCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTaaa                                   >  5:223311‑M2/40‑149 (MQ=255)                                                                                                              AAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTaaa                                   >  2:179003‑M1/1‑149 (MQ=255)                                                                                                                 GTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGTGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAAccc                                >  1:119267‑M1/1‑149 (MQ=255)                                                                                                                  tGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCAGCACCAGCAGCACCAAGGCGCGGTAAACCCa                               <  1:29167/149‑1 (MQ=255)                                                                                                                   ggcggcCACCCTCCAGGTACATGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAg                              <  5:364396/149‑1 (MQ=255)                                                                                                                    gcggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGt                             <  8:223917/149‑1 (MQ=255)                                                                                                                    gcggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGt                             <  7:65961/149‑1 (MQ=255)                                                                                                                      ggcCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTc                            >  8:267029/1‑148 (MQ=255)                                                                                                                            ccTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCCGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGCACCAg                     >  3:291844/1‑149 (MQ=255)                                                                                                                                   gTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCgccag              >  8:24847/1‑149 (MQ=255)                                                                                                                                      cacGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCTGTAAACCCAGTCGAACCAGCCgccagcc            <  5:347324/148‑1 (MQ=255)                                                                                                                                      cacGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCgccagc             >  3:189515/1‑147 (MQ=255)                                                                                                                                        cGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAgg         <  4:189515/149‑1 (MQ=255)                                                                                                                                               cttgagCAGTATGCCTTTGAGCGCGGCGGCGGCCAGGACACTGACGATGTTCACCGGGGTCGATATCACCAGCGAGAACGGTCAGGCCACCACCAGCAGCACCAACGCGCGTTAAACCCAGTCGAACCAGGCGCCAGCCAGGAACAGCg  <  2:109064‑M2/143‑1 (MQ=255)                                                                                                                                                 tgatCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGt                             <  1:352642‑M2/116‑1 (MQ=255)                                                                                                                                                 tgatCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGAAGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGt                             >  2:352642‑M2/5‑120 (MQ=255)                                                                                                                                                     cAGGATGCCTTTGCGCGCGGCGGTGGCCAGGCCACTGACGATGGTCACCGGGGTCgag                                                                                       >  3:308017/1‑58 (MQ=255)                                                                                                                                                     cAGGATGCCTTTGCGCGCGGCGGTGGCCAGGCCACTGACGATGGTCACCGGGGTCgag                                                                                       <  4:308017/58‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                               CCGCCAAGGCTTGCGCACGGTCTTCGAACAGCGGCGCCAGCACCTTGGCGTCGGTCTGCACCGGCTTGCCATGGGTGATGGTGCCGGTCTTGTCCAGGGCCAGGAAATCAAGGTGGCGGCCACCCTCCAGGTACACGCCACCCTTGATCAGGATGCCTTTGCGCGCGGCGGCGGCCAGGCCACTGACGATGGTCACCGGGGTCGAGATCACCAGCGCGCACGGGCAGGCCACCACCAGCAGCACCAAGGCGCGGTAAACCCAGTCGAACCAGGCGCCAGCCAGGAACAGCG  >  NC_002947/5864719‑5865009

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.