| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,525,550 | C→G | 6.6% | H161D (CAC→GAC) ‡ | mnmA → | tRNA 2‑thiouridine(34) synthase MnmA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,525,550 | 0 | C | G | 6.6% | 217.0 / 2.4 | 69 | H161D (CAC→GAC) ‡ | mnmA | tRNA 2‑thiouridine(34) synthase MnmA |
| Reads supporting (aligned to +/- strand): ref base C (33/31); new base G (2/3); total (35/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.73e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
CAAGTTCAAGGCGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGCGAGCGCC > NC_002947/4525405‑4525697 | cAAGTTCAAGGCGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACg > 2:42765/1‑149 (MQ=255) aaGTTCAAGGCGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGc > 8:50854/1‑149 (MQ=255) gCGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑c‑ggcgg < 7:148177/149‑1 (MQ=255) cGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑ggcggc < 2:133179/149‑1 (MQ=255) ccTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAg > 2:297831/1‑148 (MQ=255) cTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAg‑g > 5:138851/1‑148 (MQ=255) cTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAg‑g < 5:328387/148‑1 (MQ=255) cTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAg‑g > 2:229775/1‑148 (MQ=255) cGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑Gaaa > 2:322920/1‑149 (MQ=255) gACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑Gaaa < 6:328960/148‑1 (MQ=255) gACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑Gaa < 6:138851/147‑1 (MQ=255) gACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑Ga > 6:366692/1‑146 (MQ=255) gACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑Ga < 5:366692/146‑1 (MQ=255) cTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGGCCGCCG‑A‑C‑GGCGTGCAG‑Gaagtag < 5:215754/149‑5 (MQ=255) cTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCg > 1:279785/1‑149 (MQ=255) aCGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGGCCGCCG‑A‑c‑ggcgtgca < 5:223371/139‑5 (MQ=255) aCGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGGCCGCCG‑A‑c‑ggcgtgca > 6:223371/1‑135 (MQ=255) cGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGccc < 5:230608/149‑1 (MQ=255) cGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGccc > 2:337519/1‑149 (MQ=255) cccTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCg > 4:136298/1‑148 (MQ=255) gCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCAGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGt > 7:193578/1‑149 (MQ=255) atcaggtCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGc > 2:87912/7‑149 (MQ=255) aCCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGc > 3:44283/1‑149 (MQ=255) cTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGa > 1:127573/1‑149 (MQ=255) cGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTg > 6:286966/1‑148 (MQ=255) ccACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGaa < 2:127573/149‑1 (MQ=255) cACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGaa > 6:352718/1‑148 (MQ=255) gCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGccc > 2:351481/1‑149 (MQ=255) gCCACTATGCGCGCCGGCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTACCCGGTCGGCGAACTGGAAAAGccc < 4:256215/149‑1 (MQ=255) cACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCg > 4:31332/1‑148 (MQ=255) aCTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGaa < 1:229775/149‑1 (MQ=255) tgtgCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGTCCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAGCGAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGt < 1:271967/148‑1 (MQ=255) cgccgccgcGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTAcgcg < 2:279785/148‑1 (MQ=255) gccgcGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATc < 3:136298/149‑1 (MQ=255) ccgcTATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCg < 4:44283/149‑1 (MQ=255) ccgcGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCg > 7:107211/1‑149 (MQ=255) cgcgATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGc < 5:309675/149‑1 (MQ=255) gcgATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGcc > 3:245301/1‑149 (MQ=255) cTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGaaaaa < 1:351481/149‑1 (MQ=255) gcgcgcTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAacac > 1:64086/1‑149 (MQ=255) gcgcgcTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAacac < 5:352718/149‑1 (MQ=255) cTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCt < 1:337519/149‑1 (MQ=255) aCCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGc > 7:274507/1‑149 (MQ=255) ccGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGaaaa > 5:235329/1‑136 (MQ=255) ccGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGaaaa < 6:235329/136‑1 (MQ=255) tgaacgtccTGTAGCCGAACAAGTACGACAGCTACTTCTTGCAGGCCGCTACTAGCTGCCAG‑TAAATCGCCCGCACACTGTTCCCGGTCGTCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGcc < 1:297831/142‑1 (MQ=255) gggCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACTGCCTGGCCACCGCCAagaaga < 8:193578/149‑1 (MQ=255) gggCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAagaaga < 1:322920/149‑1 (MQ=255) tGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGAt > 1:157616/1‑149 (MQ=255) gACGCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCTGCGAG‑GAAATCGCCCGCACACTGTTCCCGGGCGGCGAACTGGAAAAGCCCGAAGTACGCGCAATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGAt < 7:172494/147‑1 (MQ=255) gACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTc < 7:50854/149‑1 (MQ=255) gACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTc < 3:31332/149‑1 (MQ=255) ccGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCAc > 7:70248/1‑149 (MQ=255) cGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCTGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTTGCCACCGCCAAGAAGAAAGATTCCAcc < 8:274507/149‑1 (MQ=255) gAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGaagaaaga > 6:9257/1‑141 (MQ=255) gAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGaagaaaga < 5:9257/141‑1 (MQ=255) aaCAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCaagaag > 8:191043/1‑135 (MQ=255) aaCAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCaagaag < 7:191043/135‑1 (MQ=255) aaCAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCgg > 7:203130/1‑149 (MQ=255) ggACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCt < 8:70248/149‑1 (MQ=255) aCCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGc < 4:245301/149‑1 (MQ=255) ccAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCt > 5:293776/1‑149 (MQ=255) gagCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCa > 7:285878/1‑149 (MQ=255) tttCCTGGCCGCCG‑A‑C‑GGCGTGCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGc < 5:15988/147‑1 (MQ=255) tttCCTGGCCGCCG‑A‑C‑GGCGTGCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGc > 6:15988/2‑148 (MQ=255) tCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGCGAg > 6:248016/1‑149 (MQ=255) tGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGaagaaa > 2:105371/1‑116 (MQ=255) tGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGaagaaa < 1:105371/116‑1 (MQ=255) gCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGCGAGcgcc > 2:63082/1‑149 (MQ=255) | CAAGTTCAAGGCGTTCCTCGACTACGCCCTGTCGCTGGGTGCCGACCTGATCGCCACCGGCCACTATGTGCGCCGCCGCGATACTGGCGCGCTCACCGAACTGCTCAAGGGCCTGGACCCGAACAAGGACCAGAGCTACTTCCTGCACGCCG‑T‑C‑GGCGGCCAG‑GAAATCGCCCGCACACTGTTCCCGGTCGGCGAACTGGAAAAGCCCGAAGTACGCGCCATCGCCGAAAAACACGGCCTGGCCACCGCCAAGAAGAAAGATTCCACCGGCATCTGCTTCATTGGCGAGCGCC > NC_002947/4525405‑4525697 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |