| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,731,502 | C→A | 6.9% | intergenic (‑59/+35) | lpdG ← / ← sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,731,502 | 0 | C | A | 6.9% | 229.2 / 5.9 | 82 | intergenic (‑59/+35) | lpdG/sucB | dihydrolipoyl dehydrogenase/2‑oxoglutarate dehydrogenase dihydrolipoyltranssuccinylase subunit |
| Reads supporting (aligned to +/- strand): ref base C (29/44); new base A (4/2); total (36/46) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.29e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.07e-01 | |||||||||||
AGTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGT > NC_002947/4731354‑4731649 | aGTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGc < 1:250054/149‑1 (MQ=255)aGTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGc < 2:120722/149‑1 (MQ=255) ttCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAg > 5:218243/1‑149 (MQ=255) ttCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAg > 7:216829/1‑149 (MQ=255) ttCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAg > 1:278930/1‑149 (MQ=255) ttCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATAAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCGGGCTTATTTGGAAg > 4:155957/1‑149 (MQ=255) tCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGc > 1:9480/1‑149 (MQ=255) gACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAg < 3:155957/149‑1 (MQ=255) cAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGcc < 3:345022/149‑1 (MQ=255) aGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCAGGCGTCTTTGGAAGCCCGGcccc > 2:314034/1‑148 (MQ=255) gTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCgg < 6:327538/149‑1 (MQ=255) gCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCGAGGCTTCATGCGAAGCCACGCCCCGCAccg > 6:231563/1‑147 (MQ=255) gCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACgg < 1:27397/149‑1 (MQ=255) cAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGt < 1:171121/149‑1 (MQ=255) cAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGt < 2:278930/149‑1 (MQ=255) gCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTAc < 6:286194/149‑1 (MQ=255) cTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGc < 2:41262/149‑1 (MQ=255) tGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAg > 7:3568/1‑149 (MQ=255) tGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGcc > 6:311308/1‑148 (MQ=255) gCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCaga < 5:311308/149‑1 (MQ=255) gCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCACGCCCGGCACGGTACGCAGCCa > 8:26537/1‑147 (MQ=255) aGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCGGGGGTCTTTGGAAGCCAGGCCCCGCACCGGCCGCAGcccgccg > 4:41486/1‑144 (MQ=255) acaTAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTa < 1:295758/149‑1 (MQ=255) acaTAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTa < 1:314034/149‑1 (MQ=255) tAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGAt < 2:236980/149‑1 (MQ=255) tAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGAt < 6:218243/149‑1 (MQ=255) gccTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCca < 5:44928/149‑1 (MQ=255) ccTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCcag < 8:3568/149‑1 (MQ=255) cTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCcag > 2:246403/1‑148 (MQ=255) cACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCg < 5:231563/148‑1 (MQ=255) aCCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCGGGCTTCTTGCGAAGCCAGGCCCGGCACGGTAAGCAGCCCGAGGGTTAGATGTACAGCCGCAGGCggg > 8:49972/1‑149 (MQ=255) aTTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACgg < 3:41486/149‑1 (MQ=255) ttACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGa < 2:9480/149‑1 (MQ=255) ccACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGATACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTTCGAAGCCAGGCCCGGCACGGTACGCACCCAGAGGGTTAGATGTCCAGCAGAATGCGGGACGGA‑tat > 1:58070/1‑147 (MQ=255) cACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATTTACAGCAGCAGGCGGGCCGGA‑TCtt > 4:345096/1‑149 (MQ=255) cTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTcc < 3:345096/149‑1 (MQ=255) gAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGt > 3:280813/1‑149 (MQ=255) tttCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTATTGCGAAGCCAGGCCCCGCACGGGACGCAGCCAGAGGGTTAGAAGTACAGCAGCAGGCGGGACGGaaatta > 2:297761/1‑133 (MQ=255) tCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCtt < 5:113946/148‑1 (MQ=255) tCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCtt < 7:26537/148‑1 (MQ=255) tCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCtt < 2:255219/148‑1 (MQ=255) tCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCtt < 2:101183/148‑1 (MQ=255) tGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTc < 4:141604/134‑1 (MQ=255) tGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTc > 3:141604/1‑134 (MQ=255) ggTCATAAAAGATTCCTTATCATCTACAAGCTACAAGCCGCGAAGCTCGCGGCATGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATa < 2:58070/148‑1 (MQ=255) ggTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAg < 1:333439/149‑1 (MQ=255) tAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGAc > 5:140372/1‑148 (MQ=255) aaaaGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCa < 4:280813/149‑1 (MQ=255) gATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGAGTCTTCCAGCAGGTTCTTGATAGTGACCAGGa < 1:221007/149‑1 (MQ=255) gATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGaa < 4:350076/149‑1 (MQ=255) gATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGaa < 8:216829/149‑1 (MQ=255) cTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGtt > 4:119556/1‑148 (MQ=255) cTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTa > 3:205912/1‑149 (MQ=255) tCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGAt < 8:235873/86‑1 (MQ=255) tCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGAt > 7:235873/1‑86 (MQ=255) tCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGc > 1:84169/1‑149 (MQ=255) cAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTa > 5:262825/1‑82 (MQ=255) cAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTa < 6:262825/82‑1 (MQ=255) agctacaagctacaAGCCGCGAACCGCGCGGCCAGGCTTATTGCGAACCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCACCAGCAGGCGGGACGGA‑TCTTGCAGCAGGTTATTGATAGTGACCAAGAAGGTTACAGCt > 4:63290/1‑148 (MQ=255) ctacaagcCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCtt < 7:10176/144‑1 (MQ=255) aagcCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGAt < 3:63290/149‑1 (MQ=255) aagcCGCGAACCGCGCGGCCATGCATAATTAGAAACCCCGCCCCGCACCGTACGCCGCCAAAAGGTTAGAATTGCAGCACCACGCGGGACCGA‑TCTTACAACACGTTATTTATATTTACCAGCAAAGTTAACGCTTCCATGACGTCGa > 8:184152/1‑148 (MQ=255) ccGCGAACCGCGCGGCCTGGCTTCTTGCGGAGCCAGGCCCCGCACGGTGCGCCGCCAGAGGGTTTGATGTCCAGCCCCAGGCGGGGCGGC‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCATCCATGCCGTCGCTCAg > 4:22119/1‑149 (MQ=255) ccGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAg < 3:178310/149‑1 (MQ=255) cgcgAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCca > 6:352054/1‑96 (MQ=255) cgcgAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCca < 5:352054/96‑1 (MQ=255) gAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCgg < 2:84169/149‑1 (MQ=255) cgcgcgGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAAGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGAt > 1:88301/1‑149 (MQ=255) gcgcgGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATc < 7:283308/149‑1 (MQ=255) cgcgGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCgg < 2:30125/143‑1 (MQ=255) cgcgGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCgg > 1:30125/1‑143 (MQ=255) cgcgGCCTGGCTTATTGCGAAGCCAGGCCCGGCACGGTACGCAGCCATAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTACAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGACGTCGATCAGGACGTGATCg > 8:169363/1‑149 (MQ=255) ggCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTAc < 7:184152/149‑1 (MQ=255) ggCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTAc < 6:140372/149‑1 (MQ=255) ggCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTAc < 5:234444/149‑1 (MQ=255) gCCTGGCTTCGCAAGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCa < 7:244619/134‑1 (MQ=255) gCCTGGCTTCGCAAGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCa > 8:244619/1‑134 (MQ=255) gCCTGGCTTCGCAAGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCa > 4:27847/1‑134 (MQ=255) gCCTGGCTTCGCAAGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCa < 3:27847/134‑1 (MQ=255) ccTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCtt > 6:113495/1‑122 (MQ=255) ccTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCtt < 5:113495/122‑1 (MQ=255) ccTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGa > 5:30178/1‑149 (MQ=255) ccTGGCTTCGCAAGAAGCCAGGCC‑‑GCGCGGTTCGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGa > 8:40357/1‑147 (MQ=38) cttcttGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAgcg < 3:119556/149‑1 (MQ=255) cGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGt < 3:22119/148‑1 (MQ=255) | AGTCTTCAGACCAAGTTGGGCAGCCTTGATGGCAGCCACATAGCCGCCTGGGCCTGCACCGATTACCACTACGTCGAATTTCTGGGTCATAAAAGATTCCTTATCAGCTACAAGCTACAAGCCGCGAACCGCGCGGCCTGGCTTCTTGCGAAGCCAGGCCCGGCACGGTACGCAGCCAGAGGGTTAGATGTCCAGCAGCAGGCGGGACGGA‑TCTTCCAGCAGGTTCTTGATAGTGACCAGGAAGGTTACCGCTTCCTTGCCGTCGATCAGGCGGTGATCGTACGACAGCGCCAGGT > NC_002947/4731354‑4731649 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |