| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 4,909,921 | C→G | 6.8% | intergenic (+314/+165) | PP_4318 → / ← PP_4319 | transposase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 4,909,921 | 0 | C | G | 6.8% | 169.3 / 2.8 | 59 | intergenic (+314/+165) | PP_4318/PP_4319 | transposase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base C (23/32); new base G (2/2); total (25/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.10e-01 | |||||||||||
CTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAG > NC_002947/4909774‑4910065 | tgacccgccgTAAGGGCGGGTCGCTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCccatcc < 3:306835/145‑1 (MQ=11)cTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCccatc > 6:346007/1‑148 (MQ=37)cTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTAAGCGCTGCAGGCCccatc > 5:6907/1‑148 (MQ=37) tttCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCGATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCccatcc > 2:319865/1‑148 (MQ=18) ccGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATg < 3:18039/148‑1 (MQ=33) cGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATggg < 5:346007/149‑1 (MQ=32) cGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg < 8:37421/148‑1 (MQ=32) cGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg < 7:222431/148‑1 (MQ=32) gCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgggg > 5:262433/1‑149 (MQ=32) ccTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGcc > 1:70707/1‑149 (MQ=32) ttACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCccatccat < 8:191597/141‑1 (MQ=32) ttACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCccatccat > 7:191597/1‑141 (MQ=32) cggcggGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAg < 6:285749/148‑1 (MQ=32) gcggGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCGCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATGGATGGGGCCTGCAgcg < 7:200317/149‑1 (MQ=11) gggTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCtt < 4:208874/149‑1 (MQ=32) tCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGAc > 3:322565/1‑149 (MQ=32) tCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGAc > 4:284432/1‑149 (MQ=32) aCTTTTTGTCAAACGCGACAAAAAGTAAACAAAAAACGCTGGCTCCTATCCACCCGCCCCTGCGCTACGCTCCGGGGGTCCCTCGCTACGGTCTTTCTCCCGGGATCTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACg < 1:68369/149‑1 (MQ=11) ttttGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGCGA‑GTACGCGCTGCAGGCCACATCCATGGGGCCT‑CAGCCCTTGACGGGcc > 7:173182/1‑148 (MQ=12) gTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATct < 2:280631/148‑2 (MQ=17) gTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATcc < 1:319865/148‑1 (MQ=32) gcgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGt < 1:149929/149‑1 (MQ=32) cgACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTc < 4:322565/149‑1 (MQ=32) aaaaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCt > 4:321093/1‑149 (MQ=32) aaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg < 4:184871/110‑1 (MQ=32) aaaGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg > 3:184871/1‑110 (MQ=32) ccAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg > 3:64078/1‑103 (MQ=32) ccAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATgg < 4:64078/103‑1 (MQ=32) cAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCaa < 6:93396/149‑1 (MQ=34) cAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTAGCTACGGTCTTTCTACCGGGA‑GTACGCCCTGCAGGCCCCATCCATGGGGCCT‑AAGCGCTTGACGGGCATACATGCCCGTCACCTCCCTTCGCa > 8:51993/1‑148 (MQ=11) aaaaaaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAg > 8:327346/1‑149 (MQ=34) aaaaaCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGc > 2:29307/1‑149 (MQ=34) aCGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTg < 5:341299/149‑1 (MQ=35) tGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCt > 4:316071/1‑149 (MQ=37) gCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTc < 5:200128/148‑1 (MQ=37) cTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGcc < 7:327346/148‑1 (MQ=35) tcatcCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGACCTTCt < 3:316071/149‑1 (MQ=37) cGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCGT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAg < 1:350073/148‑1 (MQ=37) cccTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCa < 6:262433/149‑1 (MQ=37) cgcTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATc < 3:270367/147‑1 (MQ=37) gCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGc < 2:70707/149‑1 (MQ=37) cGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTg > 5:267436/1‑148 (MQ=37) ccTCGCTACGGTCTTGCTCCCAGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgc > 1:62656/1‑149 (MQ=255) cTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcg > 5:105407/1‑149 (MQ=39) cTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcg < 1:343810/149‑1 (MQ=39) tACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCt > 3:256303/1‑148 (MQ=40) ggTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAc > 8:280890/1‑148 (MQ=40) gTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACaa < 6:6907/149‑1 (MQ=40) ccGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagca > 6:236983/1‑149 (MQ=255) ccGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagc > 8:289097/1‑148 (MQ=255) cGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcag < 6:105407/149‑1 (MQ=255) gggA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcaga < 6:267436/149‑1 (MQ=255) ggA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaa < 7:280890/149‑1 (MQ=255) gA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagtag < 3:284432/149‑1 (MQ=255) tACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcag < 3:321093/149‑1 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCCCGCGCTTACAAGCAAaagcagaagcagaag < 1:29307/149‑1 (MQ=255) cgcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagc < 7:289097/149‑1 (MQ=255) gcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCACAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaag > 4:302226/1‑147 (MQ=255) gcTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTAGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaag > 1:221365/1‑147 (MQ=255) tGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcag > 4:90468/1‑148 (MQ=255) tgaGGCCCCATGGATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagc < 8:277644/131‑1 (MQ=255) tgaGGCCCCATGGATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagc > 7:277644/3‑133 (MQ=255) cccATGGATGGGGCCTGCAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagcagaagcagaagcagaagcag > 1:163194/1‑148 (MQ=255) cccATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAaagc < 7:278146/127‑1 (MQ=255) cccATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGACGCCTGAACTACCGCCCCCTTACAAGCAAaagc > 8:278146/1‑127 (MQ=255) atccatGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAagcagaagcagcag > 3:49805/1‑147 (MQ=255) | CTTTCCGCCCTTACGGCGGGTCACTTTTTGTCAAACGCGACAAAAAGTAACCAAAAAACGCTGGCTCCTATCATCCGGCCCCTGCGCTACGCTCCGGGGTTCCCTCGCTACGGTCTTGCTCCCGGGA‑GTACGCGCTGCAGGCCCCATCCATGGGGCCT‑CAGCGCTTGACGGGCATCCATGCCCGTCACCTCCCTTCGCAAGCCCTGCGCTCGGCCTTCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTACAAGCAAAAGCAGAAGCAGAAGCAGAAGCAGCAG > NC_002947/4909774‑4910065 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |