| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 36,174 | A→C | 7.7% | intergenic (+59/+24) | PP_0032 → / ← PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 36,174 | 0 | A | C | 7.7% | 252.3 / 11.5 | 91 | intergenic (+59/+24) | PP_0032/PP_0033 | hypothetical protein/undecaprenyl‑glycosyl transferase |
| Reads supporting (aligned to +/- strand): ref base A (44/40); new base C (3/4); total (47/44) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.08e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.52e-01 | |||||||||||
TTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36037‑36320 | ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCt‑tttt > 7:91284/1‑149 (MQ=255)ttCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCt‑tttt < 3:101306/149‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCt‑ttttt < 8:221863/148‑1 (MQ=255) cGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTtg > 2:306036/1‑149 (MQ=255) gACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGTTTTACCCTGGCT‑TTTTtgtc < 8:91284/149‑2 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGc > 8:287757/1‑149 (MQ=255) aCCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGc < 3:25958/149‑1 (MQ=255) ccAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCt > 4:317341/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCtt > 2:57748/1‑149 (MQ=255) cAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCtt > 3:232852/1‑149 (MQ=255) gAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGAGGTTAAATAGGACTTCAAATGACGAAAGAAATAGACAATAAAGCAAGTGTAAAACCTGGCT‑TTTTTGTGCTTg > 2:215374/1‑148 (MQ=255) caaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAAt < 7:287757/149‑1 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAAtt > 8:155279/1‑149 (MQ=255) aaacaaCAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGCGTAAAACCTGGCT‑TTTTTGTGCTTGGAAtt > 4:127822/1‑149 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTTATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAATAAAGCCAGGGTAAAACCTGGCt‑ttttt > 5:315106/1‑135 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTTATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCt‑ttttt < 6:315106/135‑1 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAAtt > 4:305457/1‑147 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTa < 4:346227/149‑1 (MQ=255) acaacaAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTa < 3:317341/149‑1 (MQ=255) caaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCt < 2:221578/149‑1 (MQ=255) caaGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCt > 3:325408/1‑149 (MQ=255) aGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTc < 6:116069/149‑1 (MQ=255) gCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTc > 7:209535/1‑149 (MQ=255) tCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCtt > 4:332338/1‑149 (MQ=255) aaGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGc < 4:232852/149‑1 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 8:209535/149‑1 (MQ=255) gagCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGa < 7:155279/149‑1 (MQ=255) gCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAgg > 6:203909/1‑149 (MQ=255) aagaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGtt > 7:22115/1‑149 (MQ=255) gaaagaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTc > 3:306231/1‑149 (MQ=255) gaaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCa > 7:293585/1‑149 (MQ=255) aaagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCAt > 6:138053/1‑149 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTc > 4:253535/1‑129 (MQ=255) aagCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTc < 3:253535/129‑1 (MQ=255) agCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGAGTTTCCGCAtt > 8:149086/1‑148 (MQ=255) gCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGc > 8:211260/1‑149 (MQ=255) aGGATGGTAAGGAACGAGCCGACAATTAACCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCg < 3:4997/140‑1 (MQ=255) aGGATGGTAAGGAACGAGCCGACAATTAACCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCg > 4:4997/1‑140 (MQ=255) gTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCg < 3:127822/148‑1 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAGATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc > 4:190324/1‑149 (MQ=255) tAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGc > 7:317796/1‑149 (MQ=255) ggAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAg < 4:325408/149‑1 (MQ=255) aaGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCt > 4:330889/1‑149 (MQ=255) aGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTc < 8:317796/149‑1 (MQ=255) ccGACAATTAATCGGAGGTTAAATAGGACTTCAAATTACGAAAGAAATCGACAAAAAAGCCAGTGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCgg < 1:215374/149‑1 (MQ=255) cGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGc < 4:306231/149‑1 (MQ=255) gACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCtt < 6:200729/128‑1 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAc > 5:288658/1‑149 (MQ=255) aCAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAc > 4:66984/1‑149 (MQ=255) ttAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTtg > 6:16987/1‑149 (MQ=255) aTCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGc < 3:305457/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 3:66984/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 5:138053/149‑1 (MQ=255) ggcggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCggg < 7:149086/149‑1 (MQ=255) ggTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCg > 4:22209/1‑149 (MQ=255) aaaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc > 8:224407/1‑149 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 7:224407/148‑1 (MQ=255) aaTAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTc < 4:113299/148‑1 (MQ=255) tAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCaa > 8:70019/1‑149 (MQ=255) gACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 6:170371/1‑149 (MQ=255) ttCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 7:60108/1‑148 (MQ=255) cAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGcaca < 7:70019/148‑1 (MQ=255) aaaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg > 2:9478/1‑143 (MQ=255) aaaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATgg < 1:9478/143‑1 (MQ=255) aaTGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGACTTCGTTCTTGCGAGGCGTTTCAGCATTGCTTTCTCCGGCCAGACCCTCGGCACATTGTGCGGGGCGTTTCCAATGGCAcag > 8:264969/1‑147 (MQ=255) aCGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGa < 7:211260/148‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg > 5:309795/1‑70 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTg < 6:309795/70‑1 (MQ=255) gaaagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgct > 3:218414/1‑149 (MQ=255) aagaaaTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctgg < 5:203909/149‑1 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGCTGTTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg > 1:42524/1‑149 (MQ=255) aaTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGctggctgg > 3:283434/1‑149 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCtggctggc < 3:330889/149‑1 (MQ=255) aTCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCtggctggc > 6:310337/1‑149 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAcc > 2:91177/1‑104 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAcc < 3:268457/104‑1 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAcc < 1:91177/104‑1 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCAcc > 4:268457/1‑104 (MQ=255) gACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGtt < 8:22115/149‑1 (MQ=255) aaaaaaGCCAGGTTTTACCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgggg < 8:305340/111‑1 (MQ=39) aaaaaaGCCAGGTTTTACCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCgggg > 7:305340/1‑111 (MQ=39) aaaaGCCAGGTTTTACCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca < 8:140226/123‑1 (MQ=255) aaaaGCCAGGTTTTACCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGca > 7:140226/1‑123 (MQ=255) aaaaGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt > 8:31475/1‑149 (MQ=255) aaaaGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCtt < 3:190324/149‑1 (MQ=255) aGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCgg < 3:332338/149‑1 (MQ=255) cAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg < 3:324724/133‑1 (MQ=255) cAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg > 4:324724/1‑133 (MQ=255) ggTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCg < 8:60108/149‑1 (MQ=255) tAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 2:42524/149‑1 (MQ=255) tAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAt < 4:283434/149‑1 (MQ=255) aaaaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg > 1:134920/1‑127 (MQ=255) aaaaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAgctggctg < 2:134920/127‑1 (MQ=255) aaaaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc > 3:248440/1‑145 (MQ=255) aaaaCCTGGCT‑TGTTTGGTCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATc < 4:248440/145‑1 (MQ=255) aaaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGAtgt > 8:72607/1‑149 (MQ=255) aaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCgg > 1:127608/1‑138 (MQ=255) aaCCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCgg < 2:127608/138‑1 (MQ=255) | TTCGGACCAGAACAAACAACAAGTCGCTCAAGAGCAAAAGAAAGAAAGCAAGGATGGTAAGGAACAAGCCGACAATTAATCGGCGGTTAAATAGGACTTCAAATGACGAAAGAAATCGACAAAAAAGCCAGGGTAAAACCTGGCT‑TTTTTGTGCTTGGAATTTAGCCTTCGTTCTTGCGAGGCGTTTCCGCATTGCTTTCTCCGGCCAGACCCTCGGCACCTTGTGCGGGGCGTTTCCAATGGCACAGCAGGAGCTGGCTGGCGTTCGCTTCGGTGATCGATGT > NC_002947/36037‑36320 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |