| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,351,345 | G→T | 10.1% | intergenic (+24/+52) | PP_4706 → / ← PP_4707 | hypothetical protein/OsmY‑like protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,351,345 | 0 | G | T | 10.1% | 202.1 / 9.7 | 67 | intergenic (+24/+52) | PP_4706/PP_4707 | hypothetical protein/OsmY‑like protein |
| Reads supporting (aligned to +/- strand): ref base G (31/29); new base T (4/3); total (35/32) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.21e-01 | |||||||||||
TGCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAACCTTC > NC_002947/5351198‑5351493 | tgCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACggg > 7:333140/1‑149 (MQ=255) cgTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCACAAGAAAAAGCCCTGGCACGGGCCAgg < 1:198607/149‑1 (MQ=255) tATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑TCCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCCCGTGCCAGGGc < 5:213564/149‑1 (MQ=255) tGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCtt < 3:105287/149‑1 (MQ=255) gcgcATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGAt > 4:86268/1‑149 (MQ=255) ccAGACTGCGCATTTTCGCGAGAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGt < 8:270103/147‑1 (MQ=255) ccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCg < 8:65641/139‑1 (MQ=255) ccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCg > 7:65641/1‑139 (MQ=255) ccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGt > 7:270103/1‑147 (MQ=255) ccAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTgg > 3:312076/1‑149 (MQ=255) aGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGAACCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGc > 1:255245/1‑148 (MQ=255) cTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCaaa < 7:69267/149‑1 (MQ=255) cgcATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCACACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCaaa < 1:107178/147‑1 (MQ=255) cgcATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATc > 5:364741/1‑148 (MQ=255) cgcgACAGCCGGCCATGGGGGGCGCCTCTGAGCCGTGAGCAGTCATGCTTCGAAAGCGCTGTGAGCGCGCGCA‑ACCCGGGGTATTGAGCGCAAGACACCGCCCGGGCCCGGGCCAGGGCGTCGATGAAAGTGGCCAAATCCATTTGGc < 7:247616/148‑1 (MQ=255) cgACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGaaa > 2:194350/1‑127 (MQ=255) cgACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTCGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGa > 5:144346/1‑149 (MQ=255) cgACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGAGGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGaaa < 1:194350/127‑1 (MQ=255) gACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGAc > 8:217415/1‑149 (MQ=255) aGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACgg > 2:59958/1‑148 (MQ=255) cGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTg < 3:122827/137‑1 (MQ=255) cGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTg > 4:122827/1‑137 (MQ=255) tCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCAttt < 6:58413/134‑1 (MQ=255) tCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCAttt > 5:58413/1‑134 (MQ=255) cATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTc < 6:364741/148‑1 (MQ=255) aTTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTcc > 2:226490/1‑148 (MQ=255) aTTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTcc < 1:226490/148‑1 (MQ=255) aTTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCt > 7:274274/1‑149 (MQ=255) aTTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCt > 5:142697/1‑149 (MQ=255) tggAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTc < 3:86268/149‑1 (MQ=255) tggAGCCTCTGAACCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTc < 2:255245/149‑1 (MQ=255) ccTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAGATCCATTTGGCCGACGGGACATTCCTTATTCGGCt < 4:312076/148‑1 (MQ=255) ccTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAG‑AAAACCCCTGGCACGGGCCAAGGCTTCGATGAAAATTGCCAAATCCATTTTGCCGAAGGGGCATTCCATATTAGGcat > 3:153271/1‑146 (MQ=255) tctGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCttt > 2:113592/1‑148 (MQ=255) ctGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCttt > 1:304633/1‑147 (MQ=255) aTCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAgg < 8:333140/148‑1 (MQ=255) aTCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGc > 2:234567/1‑149 (MQ=255) cTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTCGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGt > 1:183587/1‑149 (MQ=255) gAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCa < 2:304633/148‑1 (MQ=255) aGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAg < 7:217415/148‑1 (MQ=255) gCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGAc < 8:274274/149‑1 (MQ=255) cTTCGAAAGCTATGTCATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGcc < 4:182618/133‑1 (MQ=255) cTTCGAAAGCGATGTGATCGCGCGAA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGcc > 3:182618/1‑133 (MQ=255) aGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTa > 2:361844/1‑137 (MQ=255) aGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTa < 1:361844/137‑1 (MQ=255) aGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGc < 1:234567/149‑1 (MQ=255) tCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGtt > 6:260960/1‑149 (MQ=255) cccGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATg > 3:160823/1‑149 (MQ=255) ttGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCt > 6:107484/1‑149 (MQ=255) ttGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCt > 1:75108/1‑149 (MQ=255) gAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCtt < 5:107484/148‑1 (MQ=255) cgcAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCtnn < 2:183587/149‑3 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAAt > 2:323958/1‑131 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAAt < 1:323958/131‑1 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCt > 5:133427/1‑144 (MQ=255) aaGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCt < 6:133427/144‑1 (MQ=255) tcgaaGCCCTGGCCCGTGCCAGGGCTTTGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCttt > 4:239028/4‑146 (MQ=255) tcgaaGCCCTGGCCCGTGCCAGGGCTTTGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCttt < 3:239028/143‑1 (MQ=255) aaaaaGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTg > 5:125102/1‑123 (MQ=255) aaaaaGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTg < 6:125102/123‑1 (MQ=255) aaaaGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCa < 2:260358/89‑1 (MQ=255) aaaaGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCa > 1:260358/1‑89 (MQ=255) aaGCCCTGGCCCGTGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTc > 1:82660/1‑144 (MQ=255) aaGCCCTGGCCCGTGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTc < 2:82660/144‑1 (MQ=255) aaGCCCTGGCCCGTGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGa > 8:164053/1‑149 (MQ=255) aaGCCCTCGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGa < 6:144346/149‑1 (MQ=255) cccTGGCCCGTGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTc > 4:238432/1‑149 (MQ=255) gCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTaa > 2:53236/1‑149 (MQ=255) ggCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAACCTTc < 2:75108/149‑1 (MQ=255) | TGCGGCGTATGACGCGCATACCCAGACTGCGCATTTTCGCGACAGCCGTCCATTGGTGGAGCCTCTGATCCTTGAGCAGGAATGCTTCGAAAGCGATGTGATCGCGCGCA‑ACCCGGTGTATTGAGCGCAAGAAAAAGCCCTGGCACGGGCCAGGGCTTCGATGAAAGTGGCCAAATCCATTTGGCCGACGGGACATTCCTTATTCGGCTTTCAGGCCGTCAGACATTACGCTCTTGACGCCTTTGATGTTCTTGGTAATGCGCACCGCTTCTGCTTTCTGCGATTCGGTAACCTTC > NC_002947/5351198‑5351493 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |