Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 5,360,179 G→T 8.9% L31M (CTG→ATG) ‡ nusA ← transcription termination/antitermination factor L

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029475,360,1790GT 8.9% 174.3 / 6.5 56L31M (CTG→ATG) ‡nusAtranscription termination/antitermination factor L
Reads supporting (aligned to +/- strand):  ref base G (27/24);  new base T (3/2);  total (30/26)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.82e-01

TCCAGCCAGGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGT  >  NC_002947/5360031‑5360327
                                                                                                                                                     |                                                                                                                                                    
tCCAGCCAGGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAg                                                                                                                                                      >  4:201122/1‑149 (MQ=255)
  cagccagGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAggg                                                                                                                                                    <  3:186623/149‑1 (MQ=255)
  cagccagGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAggg                                                                                                                                                    >  4:326949/1‑149 (MQ=255)
  cagccagGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAgg                                                                                                                                                     <  4:58664/148‑1 (MQ=255)
   agccagGTCTCGATCGCAGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGc                                                                                                                                                   <  7:84135/149‑1 (MQ=255)
     ccagGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCa                                                                                                                                                 >  6:328541/1‑149 (MQ=255)
         gTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACGGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTc                                                                                                                                             <  6:208463/149‑1 (MQ=255)
            tcGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAAGATACCGGTGTGGCGGTTGATTTCCAAACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTc                                                                                                                                             >  1:107784/1‑147 (MQ=255)
               aTCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGGCTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAgcgc                                                                                                                                       <  8:199712/149‑1 (MQ=255)
                  gCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTc                                                                                                                                    >  1:80081/1‑149 (MQ=255)
                      gATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGaaa                                                                                                                                <  3:201122/149‑1 (MQ=255)
                           tcaAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGAc                                                                                                                           >  5:124405/1‑149 (MQ=255)
                            caAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCAc                                                                                                                                                >  1:172181/1‑127 (MQ=255)
                            caAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCAc                                                                                                                                                <  2:172181/127‑1 (MQ=255)
                                aTCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCgg                                                                                                                      <  8:66623/149‑1 (MQ=255)
                                    gCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGTGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCgg                                                                                                                  >  3:344896/1‑149 (MQ=255)
                                     cTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGTGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGt                                                                                                                 <  4:344896/149‑1 (MQ=255)
                                      ttCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTa                                                                                                                >  6:322029/1‑149 (MQ=255)
                                          tcgACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACAcc                                                                                                            >  2:249193/1‑149 (MQ=255)
                                           cgACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACAcc                                                                                                            <  1:249193/148‑1 (MQ=255)
                                                   gtacAGCGACGGAAAGGCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGtt                                                                                                   <  8:311642/146‑1 (MQ=255)
                                                    tCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTg                                                                                                  <  2:80081/149‑1 (MQ=255)
                                                    tCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTg                                                                                                  >  4:317086/1‑149 (MQ=255)
                                                      cAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGa                                                                                                <  5:328541/149‑1 (MQ=255)
                                                       aGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGa                                                                                                >  4:52140/1‑148 (MQ=255)
                                                         cGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATAc                                                                                             <  2:107784/149‑1 (MQ=255)
                                                              gAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACAACTTTTTCGTTGTATACAGAt                                                                                         >  3:24871/1‑148 (MQ=255)
                                                               aaaGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCgg                                                                                                                      >  4:245475/1‑118 (MQ=255)
                                                               aaaGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCgg                                                                                                                      <  3:245475/118‑1 (MQ=255)
                                                               aaaGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGAtt                                                                                        >  7:317226/1‑148 (MQ=255)
                                                               aaaGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGAtt                                                                                        <  8:317226/148‑1 (MQ=255)
                                                                  gTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGCTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTcaac                                                                                    <  3:317086/149‑1 (MQ=255)
                                                                     tcGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCaacaac                                                                                 >  7:189906/1‑149 (MQ=255)
                                                                        tAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACcag                                                                              <  5:322029/149‑1 (MQ=255)
                                                                           gCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACcagca                                                                            <  3:311375/149‑1 (MQ=255)
                                                                              aCCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTa                                                                         >  8:168637/1‑149 (MQ=255)
                                                                                     tgGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCttt                                                                  <  3:326949/149‑1 (MQ=255)
                                                                                     tgGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCttt                                                                  >  6:94888/1‑149 (MQ=255)
                                                                                                   cacaCGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTAcgc                                                     >  7:283911/1‑148 (MQ=255)
                                                                                                        gTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTAcgcctcgcc                                               >  4:313219/1‑149 (MQ=255)
                                                                                                        gTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTAcgcctcgcc                                               <  5:94888/149‑1 (MQ=255)
                                                                                                                    cGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCaacaac                                                                                 <  5:352752/103‑1 (MQ=255)
                                                                                                                    cGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCaacaac                                                                                 >  6:352752/1‑103 (MQ=255)
                                                                                                                      tCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCAtt                                 >  7:135545/1‑149 (MQ=255)
                                                                                                                        ttCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTg                                                                                                  <  3:192035/82‑1 (MQ=255)
                                                                                                                            aaaCGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGccc                           <  6:124405/149‑1 (MQ=255)
                                                                                                                                 ttttttGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATa                      >  4:90923/1‑149 (MQ=255)
                                                                                                                                        gTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTccgcc               >  6:352986/1‑149 (MQ=255)
                                                                                                                                           gaaGTGGCCCTGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCgg                         >  3:289933/3‑136 (MQ=255)
                                                                                                                                           gaaGTGGCCCTGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCgg                         <  4:289933/134‑1 (MQ=255)
                                                                                                                                           gaaGTGGCCCTGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCggg            >  8:296589/3‑149 (MQ=255)
                                                                                                                                           gCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCggg            >  7:329787/1‑149 (MQ=255)
                                                                                                                                            cAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGc           >  1:229367/1‑149 (MQ=255)
                                                                                                                                             aGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGcc          >  3:219388/1‑149 (MQ=255)
                                                                                                                                              gTGGCCCTGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTgc                                           >  6:61604/1‑115 (MQ=255)
                                                                                                                                              gTGGCCCTGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTgc                                           <  5:61604/115‑1 (MQ=255)
                                                                                                                                              gTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGccc         >  4:309106/1‑149 (MQ=255)
                                                                                                                                              gTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGccc         <  3:52140/149‑1 (MQ=255)
                                                                                                                                               tGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCg        <  4:219388/149‑1 (MQ=255)
                                                                                                                                                 gCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCgg       >  8:34092/1‑148 (MQ=255)
                                                                                                                                                     gggCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGTTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGt  <  4:239323/149‑1 (MQ=255)
                                                                                                                                                     gggCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGt  <  5:352986/149‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
TCCAGCCAGGTCTCGATCGCCGGATCATCAAGATCGGCTTCGTCGACCACGGTCCAGCGACGGAAAGTCTCGTAGCTACCGGTGTGGCGGTTGATTTCCACACGTAGGTCGACTTCGTCTTCAAAACGTTTTTTGGTTGCAGTGGCCAGGGCCACTTCCAGCGCTTCGAAAATGACGCCGGGCGGTACACCTTTTTCGTTGGATACCGATTCAACAACCAGCAGTACTTCTTTGCTCATCGTACGCCTCGCCTTGCGCAAGCCATTGGGCCCGGATAGTCCGCCGGGCCCGGCACGT  >  NC_002947/5360031‑5360327

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: