| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,397,657 | A→T | 8.4% | L223F (TTA→TTT) | hsdS → | type I restriction modification system specificity protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,397,657 | 0 | A | T | 8.4% | 226.7 / 10.5 | 84 | L223F (TTA→TTT) | hsdS | type I restriction modification system specificity protein |
| Reads supporting (aligned to +/- strand): ref base A (42/35); new base T (4/3); total (46/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.85e-01 | |||||||||||
GGCCGGCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTG > NC_002947/5397513‑5397804 | ggCCGGCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAAt < 4:160542/148‑1 (MQ=255)ggCCGGCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATg > 5:111389/1‑149 (MQ=255) gCCGGCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGt > 3:241809/1‑149 (MQ=255) ggCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTgg > 4:211021/1‑149 (MQ=255) gcgcCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGc > 1:248264/1‑149 (MQ=255) gcCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCt < 1:137290/149‑1 (MQ=255) ccAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTTAATGTTGGctgg < 6:179848/149‑4 (MQ=255) tGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGAtt > 5:304562/1‑145 (MQ=255) tGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGAtt < 6:304562/145‑1 (MQ=255) ccATAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGTCAACATTAAATGTTGGCCTGATTCGTAg < 1:201614/148‑1 (MQ=255) ccAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGt > 3:359153/1‑149 (MQ=255) ccAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGt < 6:111389/149‑1 (MQ=255) cGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGATAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTg > 5:214334/1‑121 (MQ=255) cGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTg < 6:214334/121‑1 (MQ=255) cGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACctct < 4:241809/149‑1 (MQ=255) tAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGc < 4:32729/147‑1 (MQ=255) tAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGc > 3:32729/1‑147 (MQ=255) gTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTc < 2:248264/148‑1 (MQ=255) tCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGcc > 4:86005/1‑117 (MQ=255) tCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGcc < 3:86005/117‑1 (MQ=255) ccccAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGc > 1:216204/1‑135 (MQ=255) ccccAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGc < 2:216204/135‑1 (MQ=255) cccAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTTAATGTTGGctgg > 4:253275/1‑114 (MQ=255) cccAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTTAATGTTGGctgg < 3:253275/117‑4 (MQ=255) tgCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGccca > 1:128004/1‑146 (MQ=255) gCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGaa > 7:159568/1‑148 (MQ=255) cATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGaac > 5:111248/1‑148 (MQ=255) gTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAacaaca > 2:47127/1‑149 (MQ=255) ctcGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGGGAAAGCAGTTCTTGGGAGATAATCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCACCTAGCCGAACAACAcc > 5:266124/1‑149 (MQ=255) tcGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCg > 5:305227/1‑149 (MQ=255) gAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCa > 3:86062/1‑149 (MQ=255) gAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCACCGAACAACACCGCa > 5:308021/1‑149 (MQ=255) gACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGt > 6:372353/1‑149 (MQ=255) aCTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGtt < 3:211021/149‑1 (MQ=255) tctcATAATTTGGTTGCTACAAATTGACCTTATGAGAAAGCAGTTATTGGTAGATACTCGAAACCTCGCCCAGACAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTTCCTCCCCTCGCCGAACAACACCGCATCGtt < 4:249062/145‑1 (MQ=255) cTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAAGATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTg < 6:81218/149‑1 (MQ=255) cTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTg < 4:221785/149‑1 (MQ=255) cATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTcccc < 4:130045/122‑1 (MQ=255) cATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTcccc > 3:130045/1‑122 (MQ=255) aTAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACATCTGCCTCCCCTCGCCGAAAAACACCGCATCGtt > 3:249062/1‑144 (MQ=255) ttGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCgaag > 7:333511/1‑148 (MQ=255) gCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCgaagaa > 8:221354/1‑148 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAg < 5:320604/85‑1 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAg > 6:320604/1‑85 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCcgc > 7:337957/1‑91 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCcgc < 8:337957/91‑1 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTc < 2:245054/110‑1 (MQ=255) tACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTc > 1:245054/1‑110 (MQ=255) cAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAAt > 4:279624/1‑149 (MQ=255) aaGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATgg < 6:305227/149‑1 (MQ=255) aGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGc > 4:51248/1‑149 (MQ=255) gTGACCTTATGCGAAAGCAGTTCTTTGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGcc < 8:159568/149‑1 (MQ=255) gTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCACCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGcc < 6:308021/149‑1 (MQ=255) cTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATg < 2:128004/149‑1 (MQ=255) cTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATg > 3:173849/1‑149 (MQ=255) cTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATg < 3:279624/149‑1 (MQ=255) cTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATg > 8:283965/1‑149 (MQ=255) ttATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGc > 4:197437/1‑62 (MQ=255) gCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGAcc > 3:216621/1‑149 (MQ=255) cGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTc < 1:36723/88‑1 (MQ=255) cGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTc > 2:36723/1‑88 (MQ=255) gCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTgg < 6:111248/149‑1 (MQ=255) aGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGaa < 7:221354/149‑1 (MQ=255) ttCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGc > 8:345029/1‑149 (MQ=255) agaTACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAgg < 7:345029/149‑1 (MQ=255) gaTACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAgg < 4:173849/148‑1 (MQ=255) tCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTc > 7:77814/1‑100 (MQ=255) tCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTc < 8:77814/100‑1 (MQ=255) gAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGcc > 1:250029/1‑149 (MQ=255) gAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGcc < 7:283965/149‑1 (MQ=255) aCCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGa < 4:359153/149‑1 (MQ=255) cccTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGcc > 3:195687/1‑146 (MQ=255) cccTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGcc < 4:195687/146‑1 (MQ=255) ccTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGt > 4:18690/1‑149 (MQ=255) gCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAAAAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATCCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGc > 3:210898/1‑149 (MQ=255) atcaggCCAACATTTAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGc > 2:19403/6‑149 (MQ=255) cccAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGcc > 6:88759/1‑149 (MQ=255) ccAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGAc < 7:269741/136‑1 (MQ=255) ccAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGAc > 8:269741/1‑136 (MQ=255) aggCCAACATTTAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGaa < 3:276007/118‑1 (MQ=255) aggCCAACATTTAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGaa > 4:276007/3‑120 (MQ=255) ccAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCACTCGCCGAACAACACCGCATCGTTGCCAAAGTAGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCTCCCACGt < 6:266124/149‑1 (MQ=255) aCATTTAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACAAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTcc > 8:320499/1‑148 (MQ=255) aCATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTcc > 8:69234/1‑148 (MQ=255) aaaTGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTg < 2:250029/148‑1 (MQ=255) aaaTGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTg < 8:333511/148‑1 (MQ=255) | GGCCGGCGCCAACATTGCCAGAGCTATTTGCCGTGTAGTCCCCAGTGTGCATGTCTCGAAGGACTACATAATTTGGTTGCTACAAAGTGACCTTATGCGAAAGCAGTTCTTGGGAGATACTCGAACCCTCGCCCAGCCAACATTAAATGTTGGCCTGATTCGTAGTGCCGCGGCACCTCTGCCTCCCCTCGCCGAACAACACCGCATCGTTGCCAAAGTCGAAGAACTAATGGCCCTATGCGACCGCTTGGAAGCCCAGCAGGCCGACGCCGAGTCCGCCCACGTCCAACTG > NC_002947/5397513‑5397804 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |