| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 5,552,914 | T→A | 5.8% | intergenic (+577/+84) | PP_4882 → / ← PP_5717 | iron ABC transporter permease/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 5,552,914 | 0 | T | A | 5.8% | 202.1 / 2.6 | 69 | intergenic (+577/+84) | PP_4882/PP_5717 | iron ABC transporter permease/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (29/36); new base A (2/2); total (31/38) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.65e-01 | |||||||||||
TACTCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGTACA > NC_002947/5552769‑5553061 | tACTCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGc < 8:324333/149‑1 (MQ=255) aTTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGGTTCGGaaaac > 4:201687/1‑147 (MQ=255) aTTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGc > 7:183874/1‑149 (MQ=255) tCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCg < 2:279043/148‑1 (MQ=255) cgcgCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCGAAGCAAAGCCCgg < 6:281404/148‑1 (MQ=255) tcATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTTCTTAGCAAAGCCCGGaaaaatgg > 8:27449/1‑144 (MQ=255) tcATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCATTTCTTAGCAAAGCCCGGAAACTggg > 2:240200/1‑149 (MQ=255) ccgatctCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGGATCCGGGCTTTGCTTCGCAAAGCCCGGAAACTggg < 1:230727/143‑1 (MQ=255) cATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTgggg < 5:216567/149‑1 (MQ=255) cATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTgggg > 4:350194/1‑149 (MQ=255) aTAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGt < 3:244988/149‑1 (MQ=255) aTAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGt > 1:9156/1‑149 (MQ=255) gTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCa < 4:170192/149‑1 (MQ=255) gTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCa < 2:15187/149‑1 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTTCTTAGCAAAACCCGGAAAAAGGGGTTTAAGca > 4:167151/1‑148 (MQ=17) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTggg > 2:230727/1‑140 (MQ=255) aCTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCt > 7:22963/1‑149 (MQ=255) aTCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTc < 7:46893/138‑1 (MQ=255) aTCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTc > 8:46893/1‑138 (MQ=255) gTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCtt < 2:9156/149‑1 (MQ=255) gTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCtt < 3:201687/149‑1 (MQ=255) ggTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGa < 5:316311/148‑1 (MQ=255) cGTCTTGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAAGAAGGTGTTGAGGAATTGCTACTCAGAAGCCCAGACCGGGAGG‑TCCGGGCTTTGGTTCGCTATGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑tt < 5:19685/149‑1 (MQ=255) ggTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTa > 5:338060/1‑146 (MQ=255) ggTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTa < 6:338060/146‑1 (MQ=255) gtgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGGTTCGGAAAGCCCGGCAACTGGGGTTTCAGGTGGTGGCTGCTTGTGTG‑TTTAGaa > 3:316142/1‑148 (MQ=17) gtgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGaa < 3:19804/148‑1 (MQ=255) gtgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCGTTTGTTAGCAAAACCCCGGAACGGGGGGTTAAACAGGGGGGTGCGTGAGTG‑TTTTGaa > 4:19804/1‑148 (MQ=17) tgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTgggg > 2:5591/1‑116 (MQ=255) tgtACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTgggg < 1:5591/116‑1 (MQ=255) aGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGGCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATg < 8:310869/149‑1 (MQ=255) gCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATgg < 3:350194/149‑1 (MQ=255) ggTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCATAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGtt < 6:340820/149‑1 (MQ=255) aCCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTAGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAAAA‑ATGGGGTGCAtt > 2:35756/1‑149 (MQ=255) aagaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTg < 8:183874/149‑1 (MQ=255) aagaagCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCGTTTATTGGCAAAACCCCCAAAAAGCGGTTTAGGGGGGTGGGTGCGTTTGTGTTTTAAAAAAAA‑ATGGtttctataat > 8:124942/1‑142 (MQ=9) gCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAgtg < 6:256821/118‑1 (MQ=255) gCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTAGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAgtg > 5:256821/1‑118 (MQ=255) aGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCGGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGAc > 2:58061/1‑148 (MQ=255) gCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCATTTCTTAGCAAAGCCCGGAAAATGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTTTAAAAAA‑ATGGGGTGGATTCTGTTTGAACATGGCGTa > 6:337069/1‑149 (MQ=17) gAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCt > 5:346680/1‑149 (MQ=255) aCATGGTCTTGTGGAATTCCGAACCTGAAGCCAAGAGCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCGGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTc < 7:124942/148‑1 (MQ=18) cAAGGTCTTGAGGATTTCCCAACCAGAAGCCAAGACCGTCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 3:14826/149‑1 (MQ=255) cAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 6:346680/149‑1 (MQ=255) cAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 3:167151/149‑1 (MQ=255) cAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 8:54161/149‑1 (MQ=255) aaGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACACATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 1:58061/149‑1 (MQ=255) tCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTAAGCTGGTGGGTGCTTGAGTG‑TTTAGAAATAA‑ATGGGTTGCATTATGTTTGAACAGGGCTTACCTCAAGttc > 8:87221/1‑146 (MQ=18) tGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑GTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTa > 5:260394/1‑149 (MQ=255) tGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCGAAGCAAAGcc < 3:324896/58‑1 (MQ=17) tGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCGAAGCAAAGcc > 4:324896/1‑58 (MQ=17) gAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTAt > 5:287080/1‑149 (MQ=255) gAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCa < 1:240200/149‑1 (MQ=255) gAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCGTCGCAAAGCCCGGAAACTGGGGTTTGACCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTGTGTTTTACCAGGGCTTAACTCAAGTACTatatac > 8:65856/1‑146 (MQ=18) aaTTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGTTCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCaa < 7:27449/149‑1 (MQ=255) gAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTTGTTAGCCAAGCCCGGAAACTGGGGTTTGACCTGGTGGGTGCTTGAGTG‑TTTATAAAACA‑AATGGTTGGATTGTGTTTGACCAGGGCTTACCGGAAGTTCACGATGCAAAGaaa > 4:80325/1‑148 (MQ=17) gAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGGTTCGCAAAGCCCGGAAAAGGGGGTTTAAGCTGGTGGCTGGGTGTGTG‑TTTAGAAAACA‑ATTGGTTGCATTATGTTTGAACAGGGCTTACCTCAAGGACTCTAACCAAAGaaa > 6:84571/1‑148 (MQ=18) gAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTAct < 7:133483/135‑1 (MQ=255) cAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAg < 4:64667/84‑1 (MQ=255) cAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAg > 3:64667/1‑84 (MQ=255) ccaGACCGTCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAAt < 6:270050/147‑1 (MQ=255) gCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGTGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCaa < 7:144978/149‑1 (MQ=255) g‑TCCGGGCTTTGCTTCGAAAAGCATGGAAACTGGCGTTTCAGCTGGTGTCTGCTTGAGTG‑TTTAGAAAACA‑ATTGGTTTCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCa < 3:83260/148‑1 (MQ=255) tCCGGGCTTTTCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATTGGTTGCATTCTGTTTTACCAGGGCTTACCTCAAGTAATCTATCCAAATAAAAAAAAGAACAATCATTACAATCat > 4:83260/1‑147 (MQ=25) cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa < 5:138579/104‑1 (MQ=255) cGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCaa > 6:138579/1‑104 (MQ=255) cGGGCTTTGCGAAGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCa > 3:128437/1‑148 (MQ=255) tttGCTTCGCAAAGCCCGTAAACTGGTGTTTCAGCTGGTGGCTTCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAAttt < 3:143136/149‑1 (MQ=255) cTTCTCAAAGCCCGGAAACTGGTGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAATCA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGTa < 7:87221/148‑1 (MQ=255) ttCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGTACa < 6:287080/149‑1 (MQ=255) | TACTCATTTTCGCGCTCTCATAAGTCACTGCGCATCAGTTGGTACGTCTGGTGTACAGCCGGTTCACCAAGAAGCAGGCTTATGCTGAACAAGGTCTTGAGGAATTCCGAACCAGAAGCCAAGACCGGCAGG‑TCCGGGCTTTGCTTCGCAAAGCCCGGAAACTGGGGTTTCAGCTGGTGGCTGCTTGAGTG‑TTTAGAAAACA‑ATGGGTTGCATTCTGTTTGACCAGGGCTTACCTCAAGTACTCTATCCAAAGAAAAAAAAGAACAATCAGTGCAATCAGCAAAATTTGTACA > NC_002947/5552769‑5553061 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |