Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	NC_002947	5,768,096	C→T	6.8%	E926K (GAG→AAG)	PP_5060 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	NC_002947	5,768,096	0	C	T	6.8%	175.8 / 2.5	64	E926K (GAG→AAG)	PP_5060	hypothetical protein
Reads supporting (aligned to +/- strand):  ref base C (26/30);  new base T (2/2);  total (31/33)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CGGATCACGCAAACCGACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAGACATCA  >  NC_002947/5767950‑5768238                                                                                                                                                   |                                                                                                                                               cGGATCACGCAAACCGACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGc                                                                                                                                              >  4:88249/1‑149 (MQ=255)       aCGCAAACCGACAATCTGCTCGCTCAACGCGTAGAAATCCTTCGTGGCAGCCACTGCGCCCAGGATAAGCCGCTCTATCTCCGCCTGAGCCTTGGCGATCGGCCCGTCAAGCATCTTGCGCAATCGCTCGCGGGCCAACTAGCCGGAGc                                                                                                                                        >  7:331676/1‑149 (MQ=255)        cGCAAACCGACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCg                                                                                                                                       <  5:155497/149‑1 (MQ=255)        cGCAAACCGACAATCTGCTCGCTCAACGCGTGGAAATCCTTCGTGGCAGCCTCTGCGGCCAGTATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCg                                                                                                                                       <  5:149981/149‑1 (MQ=255)               cGACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTg                                                                                                                                >  5:181183/1‑149 (MQ=255)                gACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGc                                                                                                                               <  5:170784/149‑1 (MQ=255)                   aaTCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCAc                                                                                                                            >  2:64252/1‑149 (MQ=255)                     tCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCg                                                                                                                          >  5:111478/1‑149 (MQ=255)                           ggcctaaCGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAACCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAg                                                                                                                    <  2:247652/144‑1 (MQ=255)                              tcAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAgcgc                                                                                                                 >  8:346346/1‑149 (MQ=255)                                aaCGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGcgcg                                                                                                                >  3:113014/1‑148 (MQ=255)                                 aCGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGaa                                                                                                              <  3:88249/149‑1 (MQ=255)                                 aCGCGTTGAAATCCTTCGGGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGaa                                                                                                              <  3:207221/149‑1 (MQ=255)                                     gTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTTGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAattat                                                                                                          >  7:41258/1‑149 (MQ=255)                                     gTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAattat                                                                                                          >  8:161327/1‑149 (MQ=255)                                      ttGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAataatt                                                                                                         <  4:142227/149‑1 (MQ=255)                                      ttGAAAACCTTCCTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCTAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAattatt                                                                                                         <  8:331676/149‑1 (MQ=255)                                          aaTCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAgg                                                                                                     >  2:349758/1‑149 (MQ=255)                                              cTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTTGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGcc                                                                                                 <  8:41258/149‑1 (MQ=255)                                                   tGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCAtt                                                                                                                                 >  6:88177/1‑112 (MQ=255)                                                   tGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCAtt                                                                                                                                 <  5:88177/112‑1 (MQ=255)                                                                   cAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCAt                                                                              >  6:335603/1‑147 (MQ=255)                                                                    aGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAg                                                                           <  6:111478/149‑1 (MQ=255)                                                                          aGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCaa                                                                                                                     >  8:295856/1‑101 (MQ=255)                                                                          aGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCaa                                                                                                                     <  7:295856/101‑1 (MQ=255)                                                                          aGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATgg                                                                     <  7:346346/149‑1 (MQ=255)                                                                           gCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGc                                                                    <  1:349758/149‑1 (MQ=255)                                                                              gCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAg                                                                                                      <  7:319999/112‑1 (MQ=255)                                                                              gCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAg                                                                                                      >  8:319999/1‑112 (MQ=255)                                                                              gCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTAGCCGGAGCGATCATTGCAACCGTGCAAGCGCGAattattca                                                                                                       >  4:98711/1‑109 (MQ=255)                                                                                    tctcGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTTGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTg                                                           >  8:81812/1‑149 (MQ=255)                                                                                    tctcGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAAcc                                                              <  1:141115/146‑1 (MQ=255)                                                                                    tctcGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTG‑CACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGc                                                          >  7:305016/1‑149 (MQ=255)                                                                                          ccTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAg                                                                           >  5:185288/1‑127 (MQ=255)                                                                                          ccTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAg                                                                           <  6:185288/127‑1 (MQ=255)                                                                                           cTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCTCCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATgg                                                                     <  5:243701/132‑1 (MQ=255)                                                                                           cTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCTCCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATgg                                                                     >  6:243701/1‑132 (MQ=255)                                                                                                 cTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCaa                                              <  1:8991/149‑1 (MQ=255)                                                                                                     gCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCaa                                              >  5:22767/1‑145 (MQ=255)                                                                                                     gCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCaa                                              <  6:22767/145‑1 (MQ=255)                                                                                                          cGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGa                                      >  2:356513/1‑148 (MQ=255)                                                                                                           ggCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGaaa                                    <  7:161327/149‑1 (MQ=255)                                                                                                              ccGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGc                                 >  4:147862/1‑149 (MQ=255)                                                                                                               cGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAatg                                            <  6:221132/137‑1 (MQ=255)                                                                                                                 tCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTTGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGc                              <  7:81812/149‑1 (MQ=255)                                                                                                                   aaGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGt                            >  8:8146/1‑149 (MQ=255)                                                                                                                     gCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTa                          >  3:316066/1‑149 (MQ=255)                                                                                                                            gcgcAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAgg                    <  6:181183/148‑1 (MQ=255)                                                                                                                             cgcAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCt                  <  3:247220/149‑1 (MQ=255)                                                                                                                             cgcAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCt                  <  4:316066/149‑1 (MQ=255)                                                                                                                                      tcgcGGGCCAACTCGCCGGAGCGATCATTGCCCCCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCgg           >  4:130719/1‑147 (MQ=255)                                                                                                                                      tcgcGGGCCAACTCGCCGGAGCGATCATTGCAACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTa         >  4:292745/1‑149 (MQ=255)                                                                                                                                      tcgcGGGCCAACT‑‑CCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAg        >  6:157304/1‑148 (MQ=255)                                                                                                                                        gcgGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTa         <  4:113014/147‑1 (MQ=255)                                                                                                                                        gcgGGCCAACT‑‑CCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAg        <  5:157304/146‑1 (MQ=255)                                                                                                                                            gCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAGACAt    >  2:42227/1‑148 (MQ=255)                                                                                                                                            gCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAGACATc   <  2:311347/149‑1 (MQ=255)                                                                                                                                             ccAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGc                              <  7:201794/121‑1 (MQ=255)                                                                                                                                             ccAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGc                              >  8:201794/1‑121 (MQ=255)                                                                                                                                             ccAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAGACATCa  <  1:356513/149‑1 (MQ=255)                                                                                                                                              cAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGCCTGACTCgg           >  5:45484/1‑139 (MQ=255)                                                                                                                                              cAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGCCTGACTCgg           <  6:45484/139‑1 (MQ=255)                                                                                                                                                  tCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGt          <  6:15830/136‑1 (MQ=255)                                                                                                                                                  tCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGt          >  5:15830/1‑136 (MQ=255)                                                                                                                                                   |                                                                                                                                               CGGATCACGCAAACCGACAATCTGCTCGCTCAACGCGTTGAAATCCTTCGTGGCAGCCTCTGCGGCCAGGATAAGCCGCTCTATCTCGGCCTGAGCCTTGGCGATCGGCCCGTCAAGCTTCTTGCGCAATCGCTCGCGGGCCAACTCGCCGGAGCGATCATTGCCACCGTGCAAGCGCGAATTATTGAGGTGCCAGACATTGCCGTCGCGCATCAGGTATGGCCCAACCGTGCCGTCCGGACCAATGATGCGAAACGCTGCGTTATCAAGGCTGACTCGGTAGACATCA  >  NC_002947/5767950‑5768238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑