| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,060,485 | T→G | 9.2% | intergenic (+121/+60) | PP_5311 → / ← PP_5312 | signal transduction protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,060,485 | 0 | T | G | 9.2% | 219.4 / 11.7 | 76 | intergenic (+121/+60) | PP_5311/PP_5312 | signal transduction protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (34/35); new base G (2/5); total (36/40) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.35e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.58e-01 | |||||||||||
GCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTT > NC_002947/6060343‑6060631 | gCAGTTCCATGCACCGCATTAAGCATTGACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTg > 8:277270/1‑149 (MQ=255) tCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTc < 7:217367/148‑1 (MQ=255) cATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTcgcg > 8:150582/1‑149 (MQ=255) cATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTcgcg > 4:346182/1‑149 (MQ=255) aTGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCgg < 3:346182/149‑1 (MQ=255) aCCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCAc > 4:147934/1‑149 (MQ=255) aCCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCAc < 7:341721/149‑1 (MQ=255) ccGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACg > 8:283794/1‑149 (MQ=255) ccGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACg > 1:206796/1‑149 (MQ=255) cGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGc < 3:147934/149‑1 (MQ=255) cattaagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCcc < 4:321511‑M2/149‑3 (MQ=255) aagcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgct > 8:186440‑M2/1‑143 (MQ=255) agcattaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgctcc < 8:21064‑M2/149‑8 (MQ=255) ttaaCACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCccgctccca < 5:330388‑M2/147‑10 (MQ=255) acacATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGt < 8:286531/149‑1 (MQ=255) acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCgg < 1:340833/127‑1 (MQ=255) acaTAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCgg > 2:340833/1‑127 (MQ=255) aGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCg > 2:89077/1‑149 (MQ=255) gAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCAGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATcc > 1:29990/1‑149 (MQ=255) gCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTTCCCGCGAACACCGGCGAAGCCCGTGCCATTCACCGCGTCGCTTGT‑TTAGCCGGCACGCCCCCTCCCAC‑AGGTAAAGCGTCATCAAACCCCTCGGGcgt > 1:357038/1‑145 (MQ=25) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAg > 7:177054/1‑149 (MQ=255) cTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAg > 4:238617/1‑149 (MQ=255) tCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAAAAACGGCGAAGCCGGTTCCATGAACCGCTTCGATTGT‑TTCGCGTGCACCCACCCTCACAA‑CGGTAAAGCGTCAAAATACCAGTAGGTCTTCAGc > 3:230621/1‑149 (MQ=21) aaTTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCt > 6:196439/1‑149 (MQ=255) tCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTttc < 3:321511/148‑1 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt < 5:242484/149‑1 (MQ=255) aCAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTcttctt < 1:10507/149‑1 (MQ=255) cAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCttt < 7:277270/149‑1 (MQ=255) gcgcGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCACTAGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGttt < 1:89077/149‑1 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCat > 6:339518/1‑148 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg < 7:150582/149‑1 (MQ=255) gcgATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAg < 7:21064/149‑1 (MQ=255) tttGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTAtt > 1:201115/1‑149 (MQ=255) gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcat < 6:330388/149‑1 (MQ=255) gACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtca < 5:82847/148‑1 (MQ=255) aCTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTtcatc < 7:283794/149‑1 (MQ=255) tgGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAcc > 6:208361/1‑149 (MQ=255) gggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc > 4:8226/1‑149 (MQ=255) gggAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAAccc > 6:335701/1‑149 (MQ=255) gCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTgg < 5:335701/149‑1 (MQ=255) cGGGATTGCCCGCGAACACCGGCGAAGCCGTTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCACTTGa < 5:252434/149‑1 (MQ=255) gCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAc > 7:183157/1‑148 (MQ=255) cTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca < 2:201115/149‑1 (MQ=255) ttGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACca > 7:113672/1‑148 (MQ=255) gCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACcac < 5:196439/147‑1 (MQ=255) gCCCGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccct < 2:7794‑M2/149‑91 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa > 1:215228/1‑119 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCa < 2:215228/119‑1 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 2:17435/1‑149 (MQ=255) ccGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCa > 6:22303/1‑149 (MQ=255) ccGCGAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactccct < 8:62145‑M2/147‑91 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttag < 2:313147‑M2/148‑94 (MQ=255) gcgAACACCGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgcgcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaccgagtcatgcctcccttag < 7:134631‑M2/148‑94 (MQ=255) acacCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAgcg < 3:8226/149‑1 (MQ=255) ccGGCAAAGCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctat > 1:313147‑M2/1‑48 (MQ=255) cGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCgg > 7:187234/1‑149 (MQ=255) aaagCCGGTGCCATGCACCGCGGCGCCTGT‑TTCGCGGGCACGCccgctcccacagactgattgccattaagcgggcctatcgctacagtgacggcccgttttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaagc > 7:62145‑M2/2‑43 (MQ=255) aaagCCGGTGCCATGCACCGCGGCGCCGGTGTTCGCGGGCACGCccgctcccacagaatgattgccattaagcgggcctatcgctacagtgacggcccgatttttgttgcctcgctaacgaatcatgactcccttagaacgctatcaag < 5:122976‑M2/148‑106 (MQ=255) aGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGcc < 8:187234/149‑1 (MQ=255) gCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc < 7:329275/149‑1 (MQ=255) gCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGccc > 8:329275/1‑149 (MQ=255) ggTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTg < 1:17435/149‑1 (MQ=255) ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACAt > 2:50115/1‑123 (MQ=255) ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACAt < 1:50115/123‑1 (MQ=255) ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt < 2:29990/149‑1 (MQ=255) ccATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCt < 2:206796/149‑1 (MQ=255) cATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACAAGCGCCGGGTTGCCCTTGATcag > 5:22808/1‑147 (MQ=255) aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCCC‑AGGTAAAGCGTCATAATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAAACACATCACCCGAGCCGGGTTGCCCTTGATCTg > 2:191488/1‑148 (MQ=255) aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTgg < 7:136837/149‑1 (MQ=255) aTGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTg > 6:86757/1‑148 (MQ=255) tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa < 8:177054/149‑1 (MQ=255) tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa > 7:88164/1‑149 (MQ=255) tGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGa < 3:238617/149‑1 (MQ=255) cgcgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTc > 8:153994/1‑86 (MQ=255) cgcgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTc < 7:153994/86‑1 (MQ=255) cgTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCtt > 1:244370/1‑149 (MQ=255) | GCAGTTCCATGCACCGCATTAAGCATTAACACATAGCCTGCGGGAGCAACTGTCTTGCTCAATTTCTAACAGCTGGCGCGATTTTGGACTGTGGGAGCGGGCTTGCCCGCGAACACCGGCGAAGCCGGTGCCATGCACCGCGTCGCTTGT‑TTCGCGGGCACGCCCGCTCCCAC‑AGGTAAAGCGTCATCATCCCCGTCGGGCTTCAGCCTTTCTTCTTTGGTTTCAGGTATTTCATCAACCCCTGGAACCACATCACCAGCGCCGGGTTGCCCTTGATCTGGATGTGCTT > NC_002947/6060343‑6060631 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |