| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 492,314 | T→A | 7.1% | Q36L (CAG→CTG) | lptD ← | LPS‑assembly protein LptD |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 492,314 | 0 | T | A | 7.1% | 206.9 / 5.2 | 70 | Q36L (CAG→CTG) | lptD | LPS‑assembly protein LptD |
| Reads supporting (aligned to +/- strand): ref base T (33/32); new base A (3/2); total (36/34) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.66e-01 | |||||||||||
GGTCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTG > NC_002947/492171‑492462 | ggTCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCg < 8:315663/149‑1 (MQ=255) gTCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCgg < 7:64522/149‑1 (MQ=255) tCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGc < 3:337992/149‑1 (MQ=255) tCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGAACACTTGGCAGTCGAACTGTTCGGc > 7:25518/1‑149 (MQ=255) gTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGCCGAACAGTTCGACTGCCaa < 4:327743/149‑2 (MQ=255) tttCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCAc > 3:258200/1‑148 (MQ=255) gcccgccGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAgg > 8:290370/1‑149 (MQ=255) gccgcTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGc < 7:290370/149‑1 (MQ=255) ttCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACAGTTCGGCTGCCACTACGTATGAGGTGGCCagag > 3:180787/1‑149 (MQ=255) tGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGTCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGTCTTGCAGTCCCAACCACCGGCGGCGGACTCTTGGCAGTCGAACTGTTCTGCTGCCACTACGTATGAGGTGGCCAGAGGTTGc < 8:320589/149‑1 (MQ=255) gCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGTGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTg > 8:317442/1‑147 (MQ=255) ccGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGc < 3:138893/147‑1 (MQ=255) ccGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGc > 4:138893/1‑147 (MQ=255) aGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTg < 5:224128/142‑1 (MQ=255) aGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTg > 6:224128/1‑142 (MQ=255) aCGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCcagc < 6:113130/147‑1 (MQ=255) tGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgc > 8:25715/1‑149 (MQ=255) cTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTAt > 5:85944/1‑110 (MQ=255) cTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTAt < 6:85944/110‑1 (MQ=255) tCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTg > 5:289981/1‑114 (MQ=255) tCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTg < 6:289981/114‑1 (MQ=255) gTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCa < 6:235753/149‑1 (MQ=255) gTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACAGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGTAGGGCCAGCAGACCGCCGGTTACCa < 4:180787/149‑1 (MQ=255) cACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgccg > 1:166612/1‑139 (MQ=255) cACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGAccgccg < 2:166612/139‑1 (MQ=255) cGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGa < 4:351798/130‑1 (MQ=255) cGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGa > 3:351798/1‑130 (MQ=255) gcgcGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGa > 2:303800/1‑148 (MQ=255) gcgGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGTGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAAc < 7:317442/149‑1 (MQ=255) ggTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGc < 2:298886/116‑1 (MQ=255) gTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACttt < 4:258200/149‑1 (MQ=255) gCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTa > 7:200240/1‑149 (MQ=255) gCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTa < 7:25715/149‑1 (MQ=255) aaGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGc < 5:318238/105‑1 (MQ=255) aaGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGc > 6:318238/1‑105 (MQ=255) aaGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTAc > 4:61965/1‑148 (MQ=255) aCTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGAACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCgg < 8:25518/148‑1 (MQ=255) cTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCca < 8:106129/102‑1 (MQ=255) cTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCgggg > 6:125850/1‑149 (MQ=255) tGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACttt < 8:95750/133‑1 (MQ=255) tGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACttt > 7:95750/1‑133 (MQ=255) tGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTa < 7:251765/136‑1 (MQ=255) tGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTa > 8:251765/1‑136 (MQ=255) tGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCgggg > 4:334595/1‑148 (MQ=255) gggTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGAt > 6:125165/1‑149 (MQ=255) gggCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAAt < 5:125850/148‑1 (MQ=255) cTTCCAGTCCCAACCACCGACGGCGTACACTTCGCAGTCGAACTGGTCGGCAGAGACTACGTATGAGGTGGCCAGAGGTTGCAGCGCCAGCACACCGCCCGTTACAAGCAACAGAAACTTTCTACGAAACGCCGGGGATTTGaaagac > 6:261829/1‑144 (MQ=255) gCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTTCAAGCAACGGAAACTTTCTACGAATCGCGGGGGATTTCAATGCGATCt > 5:229955/1‑149 (MQ=255) aGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCtt > 1:218752/1‑148 (MQ=255) aGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCtt < 2:218752/148‑1 (MQ=255) gtgtccgccgccgGTGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAg > 1:77116/8‑149 (MQ=255) ccAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCggg < 8:317881/126‑1 (MQ=255) ccAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCggg > 7:317881/1‑126 (MQ=255) ccAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGACAGCAGACAGCCGGTTACCAGCAACGGAACCTTTCTACGAAACGCGGGAGATTTCAATGCCATCtatgtag > 8:327775/1‑143 (MQ=255) aaCCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTc > 1:160272/1‑149 (MQ=255) caccGGCGGCGGATACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGTTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTCCAATGCCATCTTATTAGTCCgg < 7:229159/149‑1 (MQ=255) caccGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCgg > 7:45900/1‑149 (MQ=255) accGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCggg > 7:94813/1‑149 (MQ=255) cggcggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTTCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCt < 7:327775/149‑1 (MQ=255) ggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCt < 8:200240/149‑1 (MQ=255) ggcggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCt < 3:61965/149‑1 (MQ=255) ggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCa < 8:1726/83‑1 (MQ=255) ggACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCa > 7:1726/1‑83 (MQ=255) cacTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGc < 2:160272/149‑1 (MQ=255) acTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGc > 8:297734/1‑148 (MQ=255) ttGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCAt > 3:22477/1‑149 (MQ=255) gtGGCAGCCGAACAGTTCGACTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCAt > 1:352954/2‑149 (MQ=255) tGGCAGCCGAACAGTTCGACTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATc > 2:122276/1‑149 (MQ=255) aCTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTg < 3:246184/134‑1 (MQ=255) aCTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTg > 4:246184/1‑134 (MQ=255) tGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGtgtg > 4:269783/1‑149 (MQ=255) | GGTCCGCAGTTTCGGCTTCGCCCGCCGCTTCGGTGCCGGAGCTGACGGCTGCACCTTCGTGCACCGGGCGCGGTGGCAAGTTGTTGACTGGGGTTTTGGGCTTGCAGTCCCAACCACCGGCGGCGGACACTTGGCAGTCGAACTGTTCGGCTGCCACTACGTATGAGGTGGCCAGAGGTTGCAGGGCCAGCAGACCGCCGGTTACCAGCAACGGAAACTTTCTACGAAACGCGGGGGATTTCAATGCCATCTTATTAGTCCGGGCTTCCTGCGTGCCATCTGCCCGCGTGTG > NC_002947/492171‑492462 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |