| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,128,087 | T→C | 84.1% | intergenic (‑203/‑719) | PP_5375 ← / → PP_5376 | LysR family transcriptional regulator/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,128,087 | 0 | T | C | 84.1% | 145.1 / 17.6 | 63 | intergenic (‑203/‑719) | PP_5375/PP_5376 | LysR family transcriptional regulator/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base T (6/4); new base C (24/29); total (30/33) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.74e-01 | |||||||||||
CTCCCTAACGCATTCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTAATGA > NC_002947/6127939‑6128233 | ctccCTAACGCATTCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGAt > 8:57796/1‑149 (MQ=255) cTAACGCATTCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGaa < 1:228078/149‑1 (MQ=255) cATTCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATa < 4:296539/149‑1 (MQ=255) ttCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAg > 4:169363/1‑148 (MQ=255) gCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑Tg < 2:277249/149‑1 (MQ=255) gAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTc < 3:355072/149‑1 (MQ=255) aaCGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑Tg > 3:32457/1‑145 (MQ=255) aaCGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑Tg < 4:32457/145‑1 (MQ=255) aGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑Tg > 6:75508/1‑140 (MQ=255) aGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑Tg < 5:75508/140‑1 (MQ=255) aGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATCACATTGAACTCGTCGTGCATTGTGTGACAGTGAACAACC‑‑CGACTGAATACATAGAACCG‑TGGTCAccc > 7:89183/1‑147 (MQ=255) cGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTcag < 4:170371/149‑1 (MQ=255) ttCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTcagcag > 8:55767/1‑149 (MQ=255) cACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCagcagc < 2:291099/148‑1 (MQ=255) aCTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCagcagc > 6:28791/1‑147 (MQ=255) tataCTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAg > 7:342757/1‑148 (MQ=255) tataCTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAg > 5:341021/1‑148 (MQ=255) cTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCAtgt > 2:191323/1‑149 (MQ=255) tGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGt > 5:79841/1‑132 (MQ=255) tGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGt < 6:79841/132‑1 (MQ=255) tGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCg < 7:57796/148‑1 (MQ=255) gCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑Tgg > 8:21677/1‑113 (MQ=255) gCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑Tgg < 7:21677/113‑1 (MQ=255) aGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGc > 2:8824/1‑149 (MQ=255) aaGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGctct < 1:191323/149‑1 (MQ=255) aGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGCCTCGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGctc < 1:289646/149‑1 (MQ=255) gATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTAGGAGCTAtt > 3:102669/1‑148 (MQ=255) tatTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGAt < 5:215358/149‑1 (MQ=255) ttCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCGCTGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATc < 1:266875/149‑1 (MQ=255) tCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATca > 5:213194/1‑148 (MQ=255) gTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGAGAGCATGTGGAACTCGGAGCTCTTGATCACAt < 7:55767/149‑1 (MQ=255) aTAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTTTGAAAGTGAACAAGC‑‑CGACTGAATCCATAGCACCG‑TGGTCACCAGAGTTCAGCAGCTAGCATGTGGAACTCGTAGCTCTTGATAACATGGATTgggt > 5:14882/1‑148 (MQ=255) tAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCGACGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGc > 2:7019/1‑149 (MQ=255) tCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTCATCACATGGCTTGGGGCCAGGATTTc < 1:8824/149‑1 (MQ=255) aaTCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAg < 6:213194/149‑1 (MQ=255) ttttAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTtgct > 5:139206/1‑149 (MQ=255) ttttAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTtgct < 8:342757/149‑1 (MQ=255) aTGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCtt > 6:200509/1‑149 (MQ=255) aTGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCtt < 5:28791/149‑1 (MQ=255) tGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTg > 3:93441/1‑149 (MQ=255) tGACAATGCACGCGGCGTGCAATGTGTGACAGTGAACAAGG‑‑CCACTGAAGCCAAAGCACCG‑TGGTCACCCGAGTTCAGCACCGACCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTg < 4:102669/149‑1 (MQ=255) cATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGa < 4:321597/149‑1 (MQ=255) aTTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGa > 1:286602/1‑148 (MQ=255) cgcgGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGccc < 6:341021/149‑1 (MQ=255) cggcgTGCATTGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAg < 8:47107/149‑1 (MQ=255) gCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGagag > 7:171127/1‑148 (MQ=255) cATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGGCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGagct > 3:297029/1‑148 (MQ=255) ttGTGTGACAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGagcag > 7:300346/1‑148 (MQ=255) aCAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTcc > 6:79062/1‑149 (MQ=255) cAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGc < 2:82217/95‑1 (MQ=255) cAGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGc > 1:82217/1‑95 (MQ=255) aGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCtt > 1:143439/1‑149 (MQ=255) aGTGAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCtt > 3:315995/1‑149 (MQ=255) gAACAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTtct < 4:93441/148‑1 (MQ=255) aaCAAGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCa < 4:315995/149‑1 (MQ=255) aaGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATg > 7:291644/1‑148 (MQ=255) aGC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTa < 8:300346/149‑1 (MQ=255) gC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCGACGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTaa < 1:7019/149‑1 (MQ=255) gC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAg < 2:121693/88‑1 (MQ=255) gC‑‑CGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAg > 1:121693/1‑88 (MQ=255) c‑‑cGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCAt > 2:196975/1‑144 (MQ=255) c‑‑cGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCAt < 1:196975/144‑1 (MQ=255) c‑‑cGACTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTAAt < 6:139206/149‑1 (MQ=255) gATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTAATGa < 5:79062/149‑1 (MQ=255) | CTCCCTAACGCATTCAGGGCAGAACGAAGCAACCGGTTCACTATACTGCACATTTGCAGAAAGATATTCGTTCCCTGAATAGGCAATATCCCAATCACTTTTAATGACATTGAACGCGGCGTGCATTGTGTGACAGTGAACAAGC‑‑CGATTGAAGCCATAGCACCG‑TGGTCACCCGAGTTCAGCAGCGAGCATGTGGAACTCGGAGCTCTTGATCACATGGCTTGGGGCCAGGATTTCGAAGGTTGCTGCCTTGGGATCAGCCCAGGAGAGCAGCAAATTCCTTCTCATGTAATGA > NC_002947/6127939‑6128233 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |