| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_002947 | 6,143,910 | A→C | 5.8% | intergenic (+149/+63) | cusF → / ← PP_5734 | copper efflux protein/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_002947 | 6,143,910 | 0 | A | C | 5.8% | 212.2 / 2.4 | 68 | intergenic (+149/+63) | cusF/PP_5734 | copper efflux protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (29/35); new base C (2/2); total (31/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.55e-01 | |||||||||||
GCCTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGATTGGCGCCCGAC > NC_002947/6143765‑6144057 | gCCTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGacac > 4:255270/1‑149 (MQ=255)gCCTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGacac > 8:183933/1‑149 (MQ=255) ccTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACg < 5:52534/149‑1 (MQ=255) ccTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTAGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACg > 7:218856/1‑149 (MQ=255) ttATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCt < 8:188937/149‑1 (MQ=255) tCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGaa < 8:233060/149‑1 (MQ=255) tGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCg > 3:253317/1‑149 (MQ=255) gTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAACGCTTGGAAGCATCTAGGAAGTCAGTGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTAGTGACACGGCCGGGAAGCGa > 7:237885/1‑149 (MQ=255) tCTGCCAACTGTTGATTCGCCCATGACCTCCTGAGGCCTCCTATCAACTGGAAAAGCTGGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAATCGAt < 7:233768/149‑1 (MQ=255) tCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGAt < 4:253317/149‑1 (MQ=255) cgCCAACGCTTGATTCGCCCATCACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGAtgt < 2:173436/148‑1 (MQ=255) ccAACGGTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGAtgt < 2:171635/147‑1 (MQ=255) ccAACGCTTGATTGGCCCAGGTCCTCCTGTAGCCTCCTATCTACTGGAAAAGCTTGGAAGGATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTgg < 8:237885/149‑1 (MQ=255) cAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTgg > 4:117840/1‑148 (MQ=255) cTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGgcg > 5:125795/1‑129 (MQ=255) cTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGgcg < 6:125795/129‑1 (MQ=255) tGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCg > 7:94029/1‑149 (MQ=255) ttCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGCCACATCGCTTCAGCgccgtgt > 3:96774/1‑132 (MQ=255) ttCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGCCACATCGCTTCAGCgccgtgt < 4:96774/138‑7 (MQ=255) gCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTaa < 1:313314/148‑1 (MQ=255) ccATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAggc > 7:262628/1‑149 (MQ=255) tGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAggcggc < 7:183933/149‑1 (MQ=255) tGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAggcggc < 8:94029/149‑1 (MQ=255) cctcctGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGCCACATCGCTTCAGCGCCGTGTCAg < 6:226441/130‑1 (MQ=255) cctcctGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGCCACATCGCTTCAGCGCCGTGTCAg > 5:226441/1‑130 (MQ=255) ctGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAACTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTTGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGagcagc < 8:325880/149‑1 (MQ=255) gCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGagcagcagc > 1:153203/1‑147 (MQ=255) gCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCga < 3:255270/149‑1 (MQ=255) ctAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGaa < 3:117840/147‑1 (MQ=255) aGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGAATCAGATCATGGTAAACCCGGCCGCTGGAGCCATTTCTGAAGTACTCACACGCCGCTGAAGAGATTTGGCAGTTCCTCCTAAGGCGGCGAGAAGCAGCGAAAAAAg > 4:354196/1‑148 (MQ=255) gCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGagcag > 5:126440/1‑135 (MQ=255) gCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGagcag < 6:126440/135‑1 (MQ=255) gAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGAtgtg > 7:35316/1‑102 (MQ=255) gAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGAtgtg < 8:35316/102‑1 (MQ=255) gAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCa > 7:78060/1‑105 (MQ=255) gAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCa < 8:78060/105‑1 (MQ=255) gAAAAGCTTCGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCa < 8:218856/147‑1 (MQ=255) aaGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGag > 6:265987/1‑122 (MQ=255) aaGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGag < 5:265987/122‑1 (MQ=255) aaGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCAcccc < 5:233043/148‑1 (MQ=255) aaGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCAcccc > 6:233043/1‑148 (MQ=255) gCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTttcttc < 8:262628/149‑1 (MQ=255) aTCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTcttctt < 5:252402/149‑1 (MQ=255) cTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGt > 6:173406/1‑128 (MQ=255) aGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAg > 5:156760/1‑149 (MQ=255) aGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACt < 1:22054/147‑1 (MQ=255) aGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACt > 2:22054/1‑147 (MQ=255) aGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGa < 2:153203/149‑1 (MQ=255) aGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCAATTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTg < 5:315606/148‑1 (MQ=255) aTTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCAc > 1:238459/1‑115 (MQ=255) aTTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCAc < 2:238459/115‑1 (MQ=255) aTTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATagag < 4:61476/149‑1 (MQ=255) ttCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATagag > 4:357639/1‑148 (MQ=255) cAGATCATGGTAACCCCGGCCTCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGTCGAGCATCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTTCAGGCGACTGAATAgagga < 3:354196/148‑1 (MQ=255) aGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAgaggag > 1:98014/1‑148 (MQ=255) aGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAgaggag > 2:4960/1‑148 (MQ=255) gTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCgaga < 6:156760/149‑1 (MQ=255) ccccGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATaa > 8:218989/1‑148 (MQ=255) cccGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATaa > 6:130352/1‑147 (MQ=255) ggCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGa > 8:269307/1‑119 (MQ=255) ggCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGa < 7:269307/119‑1 (MQ=255) ccATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATc < 3:357639/149‑1 (MQ=255) cATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGAt < 6:58711/130‑1 (MQ=255) cATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGAt > 5:58711/1‑130 (MQ=255) aTTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCt > 8:224941/1‑149 (MQ=255) tGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCAACTGAATAGAGGAGAAATCGAGAt > 5:191517/1‑124 (MQ=255) tGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCAACTGAATAGAGGAGAAATCGAGAt < 6:191517/124‑1 (MQ=255) aaGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGAtt < 7:218989/146‑1 (MQ=255) cTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGATTGgcgcac > 8:232841/1‑146 (MQ=255) tGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGATTGGCGCCCGa > 1:238950/1‑149 (MQ=255) acacGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAg < 8:149059/87‑1 (MQ=255) acacGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAg > 7:149059/1‑87 (MQ=255) acacGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGATTGGCGCCCGAc < 2:98014/148‑1 (MQ=255) | GCCTAATTATCCTGTCTGCCAACGCTTGATTCGCCCATGACCTCCTGACGCCTCCTAGCAACTGGAAAAGCTTGGAAGCATCTAGGAAGTCAGGGCGATTCAGATCATGGTAACCCCGGCCGCTGGAGCCATTTCTGAAGTACTGACACGGCGCTGAAGCGATGTGGCAGTTCCGCCTAAGGCGGCGAGCAGCAGCGAGAAAAGATCGTCACCCCAAGTTTTCTTCTTGCAGGCGACTGAATAGAGGAGAAATCGAGATAACAGCTCGCAAGGCATCCTGATTGGCGCCCGAC > NC_002947/6143765‑6144057 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |