Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_002947 6,169,588 G→A 6.9% T236I (ACT→ATT)  PP_5408 ← hypothetical protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0029476,169,5880GA 6.9% 166.2 / 2.2 59T236I (ACT→ATT) PP_5408hypothetical protein
Reads supporting (aligned to +/- strand):  ref base G (29/25);  new base A (2/2);  total (31/28)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.84e-01

CAATCAGTGCTGAACCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGT  >  NC_002947/6169442‑6169734
                                                                                                                                                  |                                                                                                                                                  
cAATCAGTGCTGAACCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAgt                                                                                                                                                   <  5:97497/148‑1 (MQ=255)
  aTCAGTGCTGAACCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAgtgt                                                                                                                                                 >  3:177957/1‑148 (MQ=255)
            aaCCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAAt                                                                                                                                      >  3:355406/1‑149 (MQ=255)
             aCCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCtattgat                                                                                                                                      >  3:350137/1‑144 (MQ=255)
             aCCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAAt                                                                                                                                      >  1:132618/1‑148 (MQ=255)
              cccGATTCTAGGATTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGTTCTTCGTGGAGGATAAAACCATAACCACGTTCCTTCCGCAATTCAGTGTCAGCTATAAAtt                                                                                                                                     >  7:342297/1‑148 (MQ=255)
                cGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATtcat                                                                                                                                  <  7:290554/149‑1 (MQ=255)
                 gATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATtcat                                                                                                                                  >  2:914/1‑148 (MQ=255)
                  aTTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATtcatca                                                                                                                                <  4:355406/149‑1 (MQ=255)
                      tAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAg                                                                                                                            >  8:90309/1‑149 (MQ=255)
                               gTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATtcat                                                                                                                                  >  5:59142/1‑134 (MQ=255)
                               gTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATtcat                                                                                                                                  <  6:59142/134‑1 (MQ=255)
                                tAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTaaa                                                                                                                  >  6:240676/1‑149 (MQ=255)
                                   tGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCt                                                                                                               >  5:306727/1‑149 (MQ=255)
                                        tAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGa                                                                                                           >  6:134252/1‑148 (MQ=255)
                                               tcatcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAAt                                                                                                   <  5:307673/149‑1 (MQ=255)
                                               tcatcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGATTCCCTAAAGCTTTGATCAACAAt                                                                                                   >  4:312456/1‑149 (MQ=255)
                                                 atcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATa                                                                                                                             >  5:35314/1‑121 (MQ=255)
                                                 atcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATa                                                                                                                             <  6:35314/121‑1 (MQ=255)
                                                  tcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAATGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAAttt                                                                                                 >  4:150739/1‑148 (MQ=255)
                                                  tcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAATGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAAttt                                                                                                 >  4:156263/1‑148 (MQ=255)
                                                  tcaAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTAAGTGTCAGCTATAAATTCATAAATAGCTTACCTAAAGCTTTGATCAACAAttt                                                                                                 >  7:148086/1‑148 (MQ=255)
                                                   caAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCATTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAAtttaa                                                                                               >  1:133764/1‑147 (MQ=255)
                                                     aaCCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCAtt                                                                                             >  6:28747/1‑149 (MQ=255)
                                                     aaCCCCTAGTAGATAAGAGCTATTAAATTAAGCAGTAAATACTGCCTGTCTTAGTGGATGATAAACCCATAACCACGTTCCTTACTCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCAtt                                                                                             <  1:255929/149‑1 (MQ=255)
                                                                 aTAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGttttt                                                                                 <  6:306727/149‑1 (MQ=255)
                                                                     gcgcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGt                                                                             >  6:175565/1‑149 (MQ=255)
                                                                     gcgcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGt                                                                             >  7:55797/1‑149 (MQ=255)
                                                                      cgcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGtt                                                                            <  5:28747/149‑1 (MQ=255)
                                                                       gcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGttt                                                                           <  1:144406/149‑1 (MQ=255)
                                                                       gcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAATGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGttt                                                                           <  3:150739/149‑1 (MQ=255)
                                                                       gcTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAATGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGttt                                                                           <  3:156263/149‑1 (MQ=255)
                                                                         tATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGc                                                                         >  7:295010/1‑149 (MQ=255)
                                                                          aTTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTGTATGTTTTTTAGTTTGCt                                                                        >  2:51726/1‑149 (MQ=255)
                                                                              actccatcAGGCCATACTGCCGGTCTTAGTGGAGGATAAACCCATAACCACGTTCCTTACTCAATTCATTGTCAGATATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTc                                                                     <  4:197230/141‑1 (MQ=255)
                                                                              aaTCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTc                                                                     >  8:207820/1‑148 (MQ=255)
                                                                               aTCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCAtt                                                                                             >  2:3491/1‑123 (MQ=255)
                                                                               aTCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCAtt                                                                                             <  1:3491/123‑1 (MQ=255)
                                                                               aTCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGa                                                                   <  2:132618/149‑1 (MQ=255)
                                                                                  aaGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCa                                                                >  5:202973/1‑149 (MQ=255)
                                                                                      aGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCg                                                            <  5:175565/149‑1 (MQ=255)
                                                                                        gCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCg                                                            >  8:194399/1‑147 (MQ=255)
                                                                                        gCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTa                                                          <  4:177957/149‑1 (MQ=255)
                                                                                               tGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGt                                                   >  8:97605/1‑149 (MQ=255)
                                                                                               tGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGt                                                   >  2:63083/1‑149 (MQ=255)
                                                                                                   ggTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTc                                                >  6:172474/1‑148 (MQ=255)
                                                                                                    gTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCaa                                              <  5:134252/149‑1 (MQ=255)
                                                                                                         cGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGt                                            <  6:202973/146‑1 (MQ=255)
                                                                                                           tGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAg                                       >  7:48829/1‑149 (MQ=255)
                                                                                                                gaTAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAggtggt                                  >  2:260501/1‑149 (MQ=255)
                                                                                                                 aTAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGgtggtg                                 <  3:312456/149‑1 (MQ=255)
                                                                                                                  tAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGgtggtg                                 <  5:240676/148‑1 (MQ=255)
                                                                                                                     aCCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCa                             <  1:260501/149‑1 (MQ=255)
                                                                                                                       ccATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTTGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAag                           <  1:63083/149‑1 (MQ=255)
                                                                                                                            aCCCCGTTCCTTACGCAATTCAGTGTCACCTATAAATTCATCAATCGCTTCCCTAAAGCTTTGATCAACACTTTCATTGTCTATGTTTTTTAGTTTGCTTTCGTGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAaggagcc                      <  8:55797/149‑3 (MQ=255)
                                                                                                                            aCCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAaggagg                       <  8:295010/148‑1 (MQ=255)
                                                                                                                                     cTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTc             <  7:90309/149‑1 (MQ=255)
                                                                                                                                         cGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCg           >  5:3292/1‑147 (MQ=255)
                                                                                                                                         cGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCg           <  6:3292/147‑1 (MQ=255)
                                                                                                                                          gCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAg        <  7:207820/149‑1 (MQ=255)
                                                                                                                                                 aGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATtgt  <  8:48829/148‑1 (MQ=255)
                                                                                                                                                  |                                                                                                                                                  
CAATCAGTGCTGAACCCGATTCTAGGCTTAAGTAATGGCCTAGGAAGTCATCAAACCCCTCGTAGATAAGCGCTATTAAATCAAGCAGGCCATACTGCCGGTCTTCGTGGAGGATAAACCCATAACCACGTTCCTTACGCAATTCAGTGTCAGCTATAAATTCATCAATAGCTTCCCTAAAGCTTTGATCAACAATTTCATTGTCTATGTTTTTTAGTTTGCTTTCGAGCACCCGTAGAACCGTTTCAAGTGCAAGGTGGTGCTCAAGGAGGCAGATCCTTCCGTAGAATTGT  >  NC_002947/6169442‑6169734

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑